Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq233 95.1 1e-14 >seq233 Length=223772 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || || | || || || || ||||| |||| ||| |||| Sbjct 211245 ATGCAAATTTTCGTGAAGACTCTCACTGGAAAGACGATTACTTTGGAGGTGGAGAGCAGC 211186 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | || || ||| ||| |||||||| ||| | || ||| || Sbjct 211185 GATACCATTGACAATGTCAAGGCAAAGATTCAAGACAAAGAGGGCATCCCACCCGACCAG 211126 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 |||||||| || | ||| ||||| ||| | ||||| | || | | || || || Sbjct 211125 CAAAGGCTCATCTTTGCCGGCAAGCAACTCGAAGACGGTCGCACGCTTTCTGACTACAAC 211066 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAA 111419 || || || ||| ||| || ||||| ||| | |||||||||||||| |||||| Sbjct 211065 ATCCAGAAGGAAAGTACTCTTCATTTGGTGCTTCGTCTGCGCGGTGGTCAATAA 211012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423037499437000