Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq233 91.5 1e-13 >seq233 Length=223772 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || ||||||| ||||||||||||||||||||||||||||| || | || || || Sbjct 211256 AGACGAAGCACCAAGTGAAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GGAAAGGGTGCG 211314 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| || | ||| ||||| ||||| || ||||| |||||||| || | || || Sbjct 211315 ACCGTCTTCGAGTTGTTTGCCAGCAAAAATGAGGCGTTGCTGATCAGGAGGAATGCCTTC 211374 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 |||||| || ||| ||| | | | |||| || || || | || Sbjct 211375 TTTGTCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCGCTACTCTCTACCTCCAAAGT 211434 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || |||||||| || ||||| |||||||| ||||| Sbjct 211435 GATCGTCTTTCCGGTGAGGGTTTTGACAAAGATCTGCAT 211473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060052988970