Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq233 86.0 4e-12 >seq233 Length=223772 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || |||||||| ||| || || || |||||||| || Sbjct 211019 CCACCGCGCAGACGAAGCACCAAATGAAGAGTACTTTCCTTCTGGATGTTGTAGTCAGAA 211078 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | ||||||| | ||| ||||| || | || | | || |||||| ||| Sbjct 211079 AGCGTGCGACCGTCTTCGAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCGGGTGGG 211138 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || || ||||| ||| ||||| || ||| | || || |||||||| | || || Sbjct 211139 ATGCCCTCTTTGTCTTGAATCTTTGCCTTG-ACATTGTCAATGGTATCGCTGCTCTCCAC 211197 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || ||||| || || |||||||||||| Sbjct 211198 CTCCAAAGTAATCGTCTTTCCAGTGAGAGTCTTCACGAAAATTTGCATA 211246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389887478225