Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq221 89.7 4e-13 >seq221 Length=819827 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| ||||| || || || || ||||| ||||| || | || ||| ||| | Sbjct 381970 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACCATCACGCTGGAGGTCGAGAGCTCG 382029 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | | || || ||||| || || || || | || ||||| Sbjct 382030 -GACACTATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCA 382088 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || ||| | || | |||||| || ||||||||||| | | || || |||||||||| Sbjct 382089 ACAAAGATTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGGACCCTGTCGGACTACAA 382148 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| ||||| || || | ||| | |||||| | ||||| || || Sbjct 382149 CATTCAGAAGGAATCCACTCTCCACCTCGTGTTGCGTTTGCGTGGCGG 382196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874442264165