Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq233 123 2e-23 >seq233 Length=223772 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || |||||||| || || |||||||| ||||| Sbjct 211246 ACCACCACGGAGACGAAGCACCAAGTGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGA 211305 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | |||||| || |||||||| | || |||||||| | || Sbjct 211306 AAGGGTGCGACCGTCTTCGAGTTGTTTGCCAGCAAAAATGAGGCGTTGCTGATCAGGAGG 211365 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || || | || | ||| | ||| ||||| || | Sbjct 211366 AATGCCTTCTTTGTCTTGGATCTT-TGCCTTGACGTTGTCAATGGTATCGCTACTCTCTA 211424 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || | ||||| ||||||||||||||| Sbjct 211425 CCTCCAAAGTGATCGTCTTTCCGGTGAGGGTTTTGACAAAGATCTGCATA 211474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702057051200