Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq206 100 3e-16 >seq206 Length=298136 Score = 100 bits (110), Expect = 3e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 147199 GGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAG 147258 || || ||||| |||| || || ||| | ||||||||||||||||| ||| | ||| Sbjct 45696 GGATTGCTCTTTATCTTGTCAATCACCTCCGCCAGCTGGTCCACGCCCTTGCCGCTGTA- 45754 Query 147259 TTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 | ||| |||||| | |||| ||| |||||||| ||||| ||||||||||||||||| Sbjct 45755 ATCGTCATCGCAGTGCGTGTACTCGGCGCCAAAGTGTCTCCATTGGAAGCCGTACACTGG 45814 Query 147318 CCCCAGGTCGCC 147329 |||| |||||| Sbjct 45815 GCCCAAGTCGCC 45826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484462604000