Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq318 473 1e-128 seq233 98.7 1e-15 >seq318 Length=903324 Score = 473 bits (524), Expect = 1e-128 Identities = 1169/1752 (67%), Gaps = 41/1752 (2%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||| ||||||||||||| ||||||||||| ||||| | |||||| Sbjct 25555 GTGCGCAGATAGTACGTGCCCGTCTTGAGTCCCTTCTTCCAGCCGTAAAAGTGCATCGAG 25496 Query 78250 GACAGCTTGGCCAGAC-TCGGGTTCTCCATGAAGA-TGTTGAGCGACTGGGACT--GGTC 78305 | |||| | ||| || |||| | || || || |||| | || |||| || Sbjct 25495 GTGAGCT-GTCCAAACGTCGGCGATTGCA-GATGAATGTTCAAG--CTTTGACTTTGGCA 25440 Query 78306 GATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGAT 78365 |||| | || || || ||||| ||||| ||||||| ||||||||||| ||||||||| | Sbjct 25439 GATGAATGCTCCACGATCGGCAGCCATCTCGATGATCGACTTTTGCGAAATCTCCCACAC 25380 Query 78366 GGTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGGC 78425 ||| ||| | ||||| | | || | ||| | | | | | | | ||| | Sbjct 25379 CGTCTTGTAGAGCGCCTTGATCCTGTCGGGTATGCCGGGAACGTTTTGGATGGAGCCGCC 25320 Query 78426 TCGCACAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGAT--TGATCTTCTGAAGATCC 78480 | |||| | | || || || ||||| || || || | || || Sbjct 25319 ATGGGCAATGATGCGGTTTTTCATGCCCTCATTCCACAGACCCTGCTCGACC--AGCTCG 25262 Query 78481 CGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATG 78540 || | || | |||| | | |||||| |||||||| || ||| ||||||| Sbjct 25261 CGCAGCAACCACGGGTTGACAACTTGGAACTCTCCGGCCAGCACACGACGCGTGTAGATG 25202 Query 78541 TTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGT 78599 |||| ||||| ||||| ||||| | ||||| || | ||||| | ||| |||||||| Sbjct 25201 TTGGATGTGTAGGGCTC-AAAGCATTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGT 25143 Query 78600 CGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCG------TCTTGATCTCGAC 78653 ||||||||||||| ||| || || || |||||||| ||| ||||| ||| | Sbjct 25142 AGGCATGGGTGCGAGCAGCAGCGAGTTGCGAAGACCGTGCTCGGAAATCTTGCTCTTCAG 25083 Query 78654 CTTTAGGCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACC 78713 | | | ||||| || ||| | | || ||||||||||| || || || Sbjct 25082 CGTGGTCCAATCCCACAAGTCAGAAGGTGTGACGCCCCACATGTCGTACTGCAGCTCTCC 25023 Query 78714 CTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCA 78773 || ||| || ||||| || | | | |||| ||| | || || | ||| || ||||| Sbjct 25022 CTTGGAGGCGGGCGAGCCTTGGTAGGTCTGGTAGGGACCGTCGCGTTGGGCAAGCTCGCA 24963 Query 78774 TGA---CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCG 78830 || ||| ||| || |||||||| | | |||||| || ||||||||||| ||| Sbjct 24962 AGAGCGCTC---CAGTGCGGCGTGGTAGATGGTCTCGAAAATTTGCTTGTTGAGCTTGCG 24906 Query 78831 CGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGAC 78890 ||| | || | ||| || | | |||||| |||||||| |||||||||| || || || Sbjct 24905 CGCTTCGGGCGAGTCAAAGGCCATGCCGAGGATCATGAAAGCATCGGCCAGACCTTGCAC 24846 Query 78891 GCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAA 78950 ||||| |||| || ||||| || | |||| || ||| ||||| || || | Sbjct 24845 TCCGATGCCGATGGGACGGTGACGGAAGTTGGAACGACGCGCCTCCTCGACGGGATAGTA 24786 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||||||| | || |||| | || ||| || || Sbjct 24785 GTTGACGTCGATGATGCGGTTCAGGTTGCCACAGATGACCTTTGCGACGGCGT-GAAGTT 24727 Query 79011 GGCGAAATCAAAATGATTTCCT-------TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063 ||| | || || | | |||||| | || ||| | ||||||| Sbjct 24726 TCTTAAAGTTGTACGACTTGGTCGAAGTGTCGATGAACGATGGCAGGGCGATGGATGCCA 24667 Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 |||||| ||||| |||||| || ||| ||||||||| || ||||||| ||| Sbjct 24666 AGTTGCAGACGGCAACCTCGTCTGGCGCAGAGTACTCGATGATCTCGGTGCACAGGTTAC 24607 Query 79124 ACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGC 79183 |||||||||||| | |||||||||||||||||| ||| || |||||||| Sbjct 24606 TGCTCTTGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTCGCCGCATCCTTGTACA 24547 Query 79184 ACATGTACGGCGTCCCGGTCTCAACCTGACTCTT-GAGAACGCCGTCCCAGATGTCCCGG 79242 ||| | || | || ||||| | || | ||| | | | ||| ||| | | | Sbjct 24546 GCATAAAGGGGTTGCCAGTCTCGATTTG-CGCTTCCAAGATGGCGTACCACAGCTTTTGC 24488 Query 79243 GCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAA 79302 ||| || |||| ||||||| || ||||| | ||||| | | | || Sbjct 24487 GCCTTGATGGTGCGCTTGGCGCGACCCTCCGCTTCGTACTTTTCGTACAGCGCTTCAAAC 24428 Query 79303 GCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCC 79362 |||| |||||||| |||| || ||| |||||||||| |||||||||| | ||| || Sbjct 24427 TCCTCGCCATAGACTTCGGCCATGCCAGGGCACTCGTTGGGGCACATCAAGCTCCACTCG 24368 Query 79363 TCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCG 79422 ||| || || || || |||||||||||| ||||||||||| || ||| || ||| Sbjct 24367 CCGTTCTGTTCGACACGCTTCATGAAGAGGTCTGGGATCCACAGCGCGTAGAACAGCTCG 24308 Query 79423 CGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCG 79482 || |||| ||||| | || || ||| ||||| || || || || | ||||| Sbjct 24307 CGTGCTCGCACTTCCTCCTTTCCGTGATTCTTGCGCAGGTCCAGGAACTCGAAAATGTCA 24248 Query 79483 GCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTG 79542 | |||||| ||||| |||||||| || | || | |||| ||| || |||| Sbjct 24247 GAGTGCCAGGGCTCGGCGTAGATGGCAAAGGCGCCAGGCCTCTTGTTGCCACCTTGGTCA 24188 Query 79543 ACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCG 79602 ||||| || || ||||||||||| ||||| |||||||| |||||||||| | | ||| Sbjct 24187 ACGTAGCGTGCAGTGTTGTTGAAGACTCGCAGCATGGGGACGATGCCGTTGCTAAAGCCA 24128 Query 79603 TTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCC 79662 || || || || | ||| | | |||||||| | | | || || || Sbjct 24127 TTGGTGCCTGCAATGTAGCTTCCGGTGCCGCGAATGTTGTGGATGCTCAGGCCTATACCA 24068 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 |||| |||| || |||||| |||||| || ||||||||||| ||||| | Sbjct 24067 CCGGCAGTCTTGCTAATCATGGCGCACGTCTTGAGAGTGTCGTAGATGCCGTCGATGCTG 24008 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 || |||||||| ||| |||||||| ||| | || |||| ||| ||||||||| Sbjct 24007 TCATCCTTCATGCAGACGAGGAAGCACGACGAGAGTTGAGGGTGAGGCGTGCCGGCGTTG 23948 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTG 79842 ||||||||||| | ||||| || ||| |||||| | ||| || | ||||||||| | Sbjct 23947 AAGAGGGTCGGGGAGGCGTGGGTAAAGTACTTTTCGGACATGAGGTTGTACGTCTCAATC 23888 Query 79843 ACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGG 79901 ||| || ||| |||||||||||||| || ||||||||||| | | || ||| || Sbjct 23887 ACGGAATCGACGTCATCGCCGTGGATGCCAACGGCGACGCGCATAATCATGTGCTGAGGA 23828 Query 79902 CGTCTCGCCGAC 79913 ||| ||| |||| Sbjct 23827 CGT-TCGGCGAC 23817 Score = 470 bits (520), Expect = 2e-127 Identities = 1159/1743 (66%), Gaps = 45/1743 (3%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | | ||||| ||||| || |||||||| ||||| ||| || || || Sbjct 23829 CCTCAGCACATGATTATGCGCGTCGCCGTTGGCATCCACGGCGATGACGTC----GATTC 23884 Query 19163 CGCGA----GACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCT 19218 || || ||| ||| |||| ||| | | |||| ||| || ||||| | |||||||| Sbjct 23885 CGTGATTGAGACGTACAACCTCATGTCCGAAAAGTACTTTACCCACGCCTCCCCGACCCT 23944 Query 19219 TTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGA 19278 ||||||||||| ||| |||| || | ||| || ||||| || |||||||| Sbjct 23945 CTTCAACGCCGGCACGCCTCACCCTCAACTCTCGTCGTGCTTCCTCGTCTGCATGAAGGA 24004 Query 19279 TGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTC 19338 ||||||||| || ||||||||||| || |||||| |||||| || |||| | Sbjct 24005 TGACAGCATCGACGGCATCTACGACACTCTCAAGACGTGCGCCATGATTAGCAAGACTGC 24064 Query 19339 CGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 ||| ||||| || | | | || || || | || | || || || Sbjct 24065 CGGTGGTATAGGCCTGAGCATCCACAACATTCGCGGCACCGGAAGCTACATTGCAGGCAC 24124 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 || || | | |||| |||||||| ||||| || |||||||||||||| || | || Sbjct 24125 CAATGGCTTTAGCAACGGCATCGTCCCCATGCTGCGAGTCTTCAACAACACTGCACGCTA 24184 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 ||| |||| || ||| ||| | ||| | || ||||||||| |||||| ||||| Sbjct 24185 CGTTGACCAAGGTGGCAACAAGAGGCCTGGCGCCTTTGCCATCTACGCCGAGCCCTGGCA 24244 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 | | ||| | | || ||||| || |||||| ||| || || | ||||| |||| Sbjct 24245 CTCTGACATTTTCGAGTTCCTGGACCTGCGCAAGAATCACGGAAAGGAGGAAGTGCGAGC 24304 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 ||||| || ||| || ||||||| || ||||| |||||| || || || || | Sbjct 24305 ACGCGAGCTGTTCTACGCGCTGTGGATCCCAGACCTCTTCATGAAGCGTGTCGAACAGAA 24364 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 || || ||| | |||||||||| |||| ||||||||| | |||| ||||| ||||| Sbjct 24365 CGGCGAGTGGAGCTTGATGTGCCCCAACGAGTGCCCTGGCATGGCCGAAGTCTATGGCGA 24424 Query 19699 GGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCG 19758 || ||| | | | ||||| | |||| ||| |||| || |||| || Sbjct 24425 GGAGTTTGAAGCGCTGTACGAAAAGTACGAAGCGGAGGGTCGCGCCAAGCGCACCATCAA 24484 Query 19759 GGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACAT 19818 ||| | | | ||| || | || | || || ||||||| |||| || | || Sbjct 24485 GGCGCAAAAGCTGTGGTACGCCATCTTGGAAGCGCAAATCGAGACTGGCAACCCCTTTAT 24544 Query 19819 GTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTC 19878 | |||||||| || |||||| |||| || ||||||||| | ||| | |||||| Sbjct 24545 GCTGTACAAGGATGCGGCGAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCAAGAG 24604 Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938 |||||||| || || ||||| ||| || ||| |||||| |||||| || || Sbjct 24605 CAGTAACCTGTGCACCGAGATCATCGAGTACTCTGCGCCAGACGAGGTTGCCGTCTGCAA 24664 Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAA------GGCCTCCTCCTTCGACTTTGC 19992 |||| ||| | |||||| | ||| || | | || || | | ||||| Sbjct 24665 CTTGGCATCCATCGCCCTGCCATCGTTCATCGACACTTCGACCAAGTCGTACAACTTTAA 24724 Query 19993 CAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAA 20052 ||| | ||| || | |||| || | || ||||| ||| ||||||| || Sbjct 24725 GAAACTTCACGCCGTCGCAAAGGTCATCTGTGGCAACCTGAACCGCATCATCGACGTCAA 24784 Query 20053 CTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGG 20112 || || || ||||| |||||| || || | || ||||| || |||| ||||| Sbjct 24785 CTACTATCCCGTCGAGGAGGCGCGTCGTTCCAACTTCCGTCACCGTCCCATCGGCATCGG 24844 Query 20113 CGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGC 20172 || || || |||||||| | ||||||||| |||||| | | || ||| ||| | || Sbjct 24845 AGTGCAAGGTCTGGCCGATGCTTTCATGATCCTCGGCATGGCCTTTGACTCGCCCGAAGC 24904 Query 20173 GCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTG 20232 |||| ||||||||||| || |||||| || | |||||||| || || | || || Sbjct 24905 GCGCAAGCTCAACAAGCAAATTTTCGAGACCATCTACCACGCCGCACTGGAGCGCTCTTG 24964 Query 20233 CGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGG 20292 ||| || ||| || ||||| || ||| |||| | | | || |||||||| ||| |||| Sbjct 24965 CGAGCTTGCCCAACGCGACGGTCCCTACCAGACCTACCAAGGCTCGCCCGCCTCCAAGGG 25024 Query 20293 TATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTT-TTGGAGCGCCCTCAAGG 20351 || ||| ||||||||||||||||| ||| || | ||| | | || | Sbjct 25025 AGAGCTGCAGTACGACATGTGGGGCGTCACACCTTCTGACTTGTGGGATTGGAC-CACGC 25083 Query 20352 TTGAGATCAAGA---CC---CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGA 20405 | ||| ||||| || ||||| |||||||||||| |||| |||| |||||||| | Sbjct 25084 TGAAGAGCAAGATTTCCGAGCACGGTCTTCGCAACTCGCTGCTGCTCGCACCCATGCCTA 25143 Query 20406 CCGCCTCGACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAAC 20464 ||||||| ||| | ||||| | || ||||| | ||||| ||||| ||||| ||||| Sbjct 25144 CCGCCTCCACCTCTCAGATTCTCGGCTTCAACGAATGCTTT-GAGCCCTACACATCCAAC 25202 Query 20465 ATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGC 20524 |||||| ||||||| |||||||| |||||| | || ||| | || | ||| Sbjct 25203 ATCTACACGCGTCGTGTGCTGGCCGGAGAGTTCCAAGTTGTCAACCCGTGGTTGCTGCGC 25262 Query 20525 GACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA-TGAA--ATTGTCCGAGCC 20581 || || || | | ||||| || || || | | |||| || | | Sbjct 25263 GAGCTGGTCGAGCAGGGTCTGTGGAATGAGGGCATGAAAAACCGCATCATTGCCCATGGC 25322 Query 20582 GGCGGGAGCGTCCAGGCATT----GGATATCCCCCAGAACCTCAAGGACATTTACAGGAC 20637 ||| | | | | | || | ||| || ||| | |||||| | |||| ||| Sbjct 25323 GGCTCCATC--CAAAACGTTCCCGGCATACCCGACAGGA--TCAAGGCGCTCTACAAGAC 25378 Query 20638 CGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACAT 20697 || ||||| || | || ||| |||||||| ||||| |||||||| || || | ||| Sbjct 25379 GGTGTGGGAGATTTCGCAAAAGTCGATCATCGAGATGGCTGCCGATCGTGGAGCATTCAT 25438 Query 20698 CGACC--AGTCCCAG-TCGCTCAATGTCTTCATGGAGAAT--CCGAGCCTGGCGAAGCTG 20752 | || |||| || | | || ||||| ||| |||| | | |||| Sbjct 25439 CTGCCAAAGTCAAAGCTTGAACA-----TTCATCTGCAATCGCCGACGTTTGGACAGCTC 25493 Query 20753 AGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGG 20812 | ||| ||||| | ||||||||| | ||||| ||||||||||||| |||||||||||| Sbjct 25494 ACCTCGATGCACTTTTACGGCTGGAAGAAGGGACTCAAGACGGGCACGTACTATCTGCGC 25553 Query 20813 ACC 20815 ||| Sbjct 25554 ACC 25556 >seq233 Length=223772 Score = 98.7 bits (108), Expect = 1e-15 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 59985 CTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTC 60044 || || || ||||| ||| || || ||||||||||| || || || | | || || Sbjct 43371 CTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGATCTTTTGCTTCCATCTTT 43312 Query 60045 TGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGG 60104 |||||||| ||| | || || |||||||| ||||| |||||||| ||||| || ||||| Sbjct 43311 TGGCTCAAGAAGAGGGGTCTGATGCCGGGACTGAGCTTCTCCAATGAGCTCATCTCCCGA 43252 Query 60105 GACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCT 60151 ||||| || || || || ||||| || | ||||| ||| ||||| Sbjct 43251 GACGAAGGTCTTCACACCGACTTTGC-CTGCCTGCTCTTTTCCCACCT 43205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521474568400