Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq206 91.5 1e-13 >seq206 Length=298136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 179/261 (69%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 |||| || ||||| || | || |||||| | || ||| ||| ||| || | || || Sbjct 45655 CTTTTGGATTCCATGCACTCAGGATGATTCTCCGATCTGTTGGATTGCTCTTTATCTTGT 45714 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTG 27498 | | | | |||||| ||||| ||| | || ||| || | | || || |||| Sbjct 45715 CAATCACCTCCGCCAGCTGGTCCACGCCCTTGCCGCTGTAATCGTCATCGCA-GTGCGTG 45773 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||| || || || || ||||||||||| |||||||| || |||| ||| | ||||| Sbjct 45774 TACTCGGCGCCAAAGTGTCTCCATTGGAAGCCGTACACTGGGCCCAAGTCGC---CTTCC 45830 Query 27559 CTGTGCTC---GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 27615 || |||| || || | | ||| ||||| |||| || || ||| ||||||| || Sbjct 45831 CTACGCTCCTTTAACCCGCGCGAGTCTAAAAACGCTCTCGAGCCATTGCCGTCCCAAATG 45890 Query 27616 TTTACCCCCTTCTCGGAGAGC 27636 | ||||| | |||| |||| Sbjct 45891 TGCACCCCTCTGTCGGTGAGC 45911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505015866035