Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq109030 116 4e-21 seq107811 104 3e-17 seq23854 89.7 6e-13 seq15205 84.2 3e-11 >seq109030 Length=5052 Score = 116 bits (128), Expect = 4e-21 Identities = 247/365 (68%), Gaps = 13/365 (4%) Strand=Plus/Plus Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATC 145986 |||||||| ||| | |||| || || || | ||| | | | |||||| || || Sbjct 2346 GGGTTCCATGCGCTCAGGATGATCCGTCTATCCATGGGCTCACACCTGATCTTCCTAATG 2405 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046 | ||| ||| ||||| ||||||||||| ||| || | | | ||||| |||| Sbjct 2406 ACCTCCGCGAGTTGGTCAACGCCCTGCCCGGCGTAGTCAGCGTCGCAGTCCGTGTACTGT 2465 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG--- 146103 || || ||||||||||||||||||||||| | || || |||||||| || | | Sbjct 2466 GCGCCAAAGTGCCTCCACTGGAACCCGTATATCGGGCCGAGGTCCCC---TTCGCGGCGA 2522 Query 146104 TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACG 146163 ||| ||||||| | |||||||| | || ||||| || | || ||||| | | Sbjct 2523 TGCGCCAGCCCTCGCGCATCGAGGAAGGCGCGAGACCCATTCGGGTTCCAGA--TGCGCA 2580 Query 146164 CCCCTCGCGGAGAGCTCATTG--GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTT 146221 | ||| || | ||| || | |||||| | ||| | | |||||| |||||||| Sbjct 2581 CACCTTGCCGCGAGAGCAGCGCCCCGTCCGTCGCCCCGCGCACGAACCACAGCAGCTCCG 2640 Query 146222 CGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGG---GGAACTGGCCCCGCA 146278 ||| || || | | |||||| | ||| || |||||||| | | | |||| | |||| Sbjct 2641 CGATCACGCCACGCAGGAAGACGCGCTTTGTCGTCAGCAGTGGCAGTATCTGGTCGCGCA 2700 Query 146279 GGGAG 146283 ||||| Sbjct 2701 GGGAG 2705 >seq107811 Length=6275 Score = 104 bits (114), Expect = 3e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 || |||||| || ||||| || | | || || | ||||| |||||||| | ||| Sbjct 4284 GACGAAGTCGCCCACGTCGAGACCTGCCTGCTGCGCCATCATGTGCGTCAGCAGCGCGTA 4343 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||| || ||||| ||||| || || ||||| | |||||||||||||||||| Sbjct 4344 CGAGGCGATATTGAACGGCACGCCGAGGAAGATGTCGGCGCTGCGCTGGTACAGCTGGCA 4403 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||| || | || |||||||||||| |||| |||||| |||||||| ||| Sbjct 4404 CGAGAGCTTGCCATCGGCGACGTAGAACTGGAACAGCGCGTGGCAAGGCGGCAGTTTCAT 4463 Query 145911 -GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 ||||| | ||| ||| |||||| || | || || || Sbjct 4464 CTGCGGG-ATGTCGGCCACGTTCCATGCCGAGACGATGA 4501 >seq23854 Length=6065 Score = 89.7 bits (98), Expect = 6e-13 Identities = 113/154 (73%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 145829 CCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGA 145888 |||||||||| || |||||||| || ||| ||| || || ||||||||| ||||| Sbjct 2 CCGAGCGCTGATAGAGCTGGCACGACAGCCTGCCGTTGGCGACATAGAACTGGAACAGGC 61 Query 145889 GGTGGCAGGGCGGCAGGGCCATGGCG---GGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 ||||||||||||| | || || |||| |||||||||||||||||| |||| | Sbjct 62 AATGGCAGGGCGGCA---ACTTGACGAGAGGCACGTCCGCCGGGTTCCAGGCCGTGACAA 118 Query 145946 CGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTC 145979 || | | || || || || | ||||||||| Sbjct 119 TCAGGCGGCGACTGTCCGGATTGCGCTTGATCTC 152 >seq15205 Length=1481 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG- 145730 |||||| || || |||||||||||||| ||||| ||| ||| || | ||| Sbjct 1300 AGCTGGGTCTGCACCTGCTCCACGTGGTTGTCGTAGATGTGACAGTCGCC--GCCCGTCC 1357 Query 145731 -GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789 ||||||||| ||| | | ||| | | ||||| | ||| |||||||| | | Sbjct 1358 AGATGAAGTCGCCGAGTTGCAGGTCGCACTGCTGGGCCAGCATCATTGTCAGCAGCGCAT 1417 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 ||||||| |||||||| ||||| ||||| ||||| | ||||||||| ||||||| Sbjct 1418 AGCTGGCGATGTTGAAAGGCACGCCCAGGAAGATGTCGGCGCTGCGCTGGTAGAGCTGGC 1477 Query 145850 AGGA 145853 |||| Sbjct 1478 AGGA 1481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589256585872040