Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq109776 275 6e-69 seq107681 205 1e-47 seq58313 170 2e-37 seq110395 143 3e-29 seq106734 132 5e-26 seq101313 91.5 2e-13 seq109771 87.8 2e-12 seq101312 86.0 6e-12 >seq109776 Length=48066 Score = 275 bits (304), Expect = 6e-69 Identities = 407/572 (71%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || || ||||| | |||||| ||||||| Sbjct 4462 ATATGGCAAATGTACAAGAAGGCCGAAGCCTCATTTTGGACTGCAGAGGAGATGGACCTC 4403 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| |||||| || ||| | |||||||||||||| ||||||||| Sbjct 4402 TCAAAGGATTTACATGACTGGAAGAACCGCCTCAACGACAACGAGCGTCATTTCATCTCT 4343 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || || || ||| || || |||||||||||||| || |||||||| Sbjct 4342 CATGTCCTCGCTTTCTTTGCAGCCTCTGATGGTATCGTCAACGAGAACCTCGTCGAGCGC 4283 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| || | || ||||| || ||||||||||| ||||| ||| ||| Sbjct 4282 TTCTCGAATGAGGTCCAAGCCGCAGAGGCTCGCTGCTTCTACGGTTTTCAAATCATGATG 4223 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTC- 116928 |||||| | ||||| || | || ||| ||||| || || ||| | | || | Sbjct 4222 GAGAACATTCACTCCGAGACCTACTCGCTTCTCATTGATACTTACATTAAAGACCCTGCT 4163 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | | ||| | | || || |||| ||||||| || || || ||||| || || Sbjct 4162 GAACGTGAA--TACCTT--TTCGACGCTGTCGAGACCATTCCCTGTGTCAAGCGCAAAGC 4107 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || ||||| || |||||||| | | || || | | || | |||||||| | || Sbjct 4106 AGAATGGGCTCTTCGCTGGATTTCGGACAAGAAGACTTCGTTTGCTGAGCGCCTCATCGC 4047 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 || || || || ||||| ||||||| || || |||||| ||||| |||||||| || Sbjct 4046 TTTTGCTGCGGTTGAGGGGATCTTCTTCTCCGGTTCTTTCGCGGCCATTTTTTGGCTGAA 3987 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| ||||| |||||||||||| |||| || ||| ||||||||| | | ||||| || Sbjct 3986 GAAGCGCGGTCTCATGCCCGGCTTGACATTTTCCAATGAGCTCATCAGCCGAGACGAAGG 3927 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 |||| |||||| ||||| || |||||| Sbjct 3926 CATGCACACCGACTTCGCCTGCCTGTTGTTCA 3895 >seq107681 Length=5071 Score = 205 bits (226), Expect = 1e-47 Identities = 394/579 (68%), Gaps = 8/579 (1%) Strand=Plus/Plus Query 116618 CCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACC 116677 || ||| ||||||| | || ||| ||||| ||||| | || || || ||||| Sbjct 3652 CCTATAAAATACCCTGCTATTTGGGAGATGTATAAAAAATCGGAAGCCAGCTTTTGGACA 3711 Query 116678 GTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAG 116737 | ||| || | |||||||| | ||| || | ||||| | ||||| |||| Sbjct 3712 GCCGAAGAAATTGACCTGTCGGACGACCTGAAACATTGGGAAGCCATGAACCCGGGCGAG 3771 Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797 |||||||| |||| | ||||| ||||| ||||||||||| || || || ||||| Sbjct 3772 AAACATTTCATTTCGCACATCCTGGCTTTTTTTGCCGCCAGCGATGGTATTGTGAACGAA 3831 Query 116798 AATCTGGTCGAGCGTTTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856 || || | | | ||| | || |||||||| | |||| || || ||||| ||||| Sbjct 3832 AACCTTGCTGTGAACTTCA-TGAGCGAGGTGCAATTACCCGAAGCCCGTTGCTTTTACGG 3890 Query 116857 CTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||||| ||||||||| | ||||| || | || || || || || || || Sbjct 3891 TTTTCAGATCATGATGGAGAACATCCACTCAGAGACCTACGCGCTACTGATAGATACTTA 3950 Query 116917 CGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGT 116976 | | ||| || || |||||||| |||| | || ||||| || || || Sbjct 3951 CATTAAAGACCCGGTTGAAAAAGATCGTTTGTTCCACGCGGTTGATACGATTCCATGTGT 4010 Query 116977 CAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGA 117036 || ||||||| |||||||||||||||||||| || | | | |||| | ||| Sbjct 4011 GCAAAAGAAGGCAGAGTGGGCGCTGCGCTGGAT------CAACAACGGCACCTTTGCCGA 4064 Query 117037 GCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCAT 117096 ||| |||| || || ||||| || || ||| | |||||||| || || ||| | || Sbjct 4065 GCGTTTGGTAGCATTTGCGGCTGTTGAAGGCATTTTCTTTTCAGGGAGCTTCTGTTCTAT 4124 Query 117097 ATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTC 117156 || ||| | || ||||| ||||| |||||||| |||| || || ||||| || || || Sbjct 4125 CTTCTGGTTAAAAAAACGTGGCCTGATGCCCGGATTGACCTTTAGTAACGAACTGATATC 4184 Query 117157 CAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 | || || ||| || ||||| |||||||| |||| Sbjct 4185 GCGCGATGAAGGTTCACACTGCGAATTTGCCTGCCTGCT 4223 >seq58313 Length=1260 Score = 170 bits (188), Expect = 2e-37 Identities = 247/348 (71%), Gaps = 7/348 (2%) Strand=Plus/Plus Query 116858 TTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 || |||||| |||||||| | |||||||||| || | | |||||||| ||| Sbjct 2 TTCCAGATCATGATGGAGAATATCCACTCGGAAACCTACGCTTTGTTGATCGACACTTAC 61 Query 116918 GTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTC 116977 || ||| || ||| || ||||| |||| ||||| || || || || || Sbjct 62 GTAAAAGACCCGGCCGAAAAGGATCGGTTGTTCCACGCTATCGACACCATACCATGTGTG 121 Query 116978 AAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAG 117037 | |||| ||||| |||||||||||||||||| | | | | ||| | |||| Sbjct 122 CAGAAGAAAGCCGAATGGGCGCTGCGCTGGATCAACAACGGCAA------CTTTGCCGAG 175 Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 || ||||||| || || || || || ||| ||||||||||||| |||||| | | || Sbjct 176 CGTTTGGTGGCATTTGCTGCGGTTGAAGGCATCTTCTTTTCGGGTAGTTTCTGCTCTATC 235 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157 || ||||| || |||||||| | ||||| || ||||||||||| |||||||| || || Sbjct 236 TTCTGGCTGAAAAAACGCGGATTGATGCCAGGGCTGACTTTCAGTAACGAGCTGATATCG 295 Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 | || || ||| ||| ||||| |||||||| |||||| | ||||| Sbjct 296 CGCGATGAAGGTTCGCACTGCGAATTTGCCTGCCTGCTGTAC-AGCAT 342 >seq110395 Length=10286 Score = 143 bits (158), Expect = 3e-29 Identities = 177/238 (74%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || || || || |||||| |||| |||||| | || Sbjct 9756 ATGCAGATCTTCGTTAAGACGCTTACTGGGAAGACGATCACCCTCGAGGTCGAATCGTCC 9815 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| ||||| | || || || ||||||||| | || || Sbjct 9816 GATACCATCGACAACGTT-AAGGCCAAAATCCAGGATAAGGAAGGCATCCCCCCCGATCA 9874 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| ||| ||||| ||||| || |||| ||| |||||| ||||||||| Sbjct 9875 ACAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACCCTCTCCGACTACAA 9934 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG-CTTGAGGGGCGGCGGCTTGCA 40925 ||||||||||||| |||| || ||| | || | || ||| |||||||| |||| Sbjct 9935 CATCCAGAAGGAGTCCACCCTCCATTTGGTCCTCCGTCTT----CGCGGCGGCATGCA 9988 Score = 141 bits (156), Expect = 1e-28 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| || |||||||| || || ||||||||| |||| ||||| | || Sbjct 9984 ATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTCGTCC 10043 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || |||||||| | ||||| Sbjct 10044 GACACCATCGATAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCA 10102 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || ||||| ||| |||| |||| ||||| ||| ||| ||||| Sbjct 10103 GCAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTACAA 10162 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||| | || || ||||| Sbjct 10163 TATCCAGAAGGAATCGACCCTCCATCT 10189 >seq106734 Length=403 Score = 132 bits (146), Expect = 5e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || |||||||||||||| || ||||| | || || || | | Sbjct 31 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACAATCACGCTGGAGGTAGAGTCTTCG 90 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| || || |||||| | ||||| Sbjct 91 GACACTATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCCGACCA 149 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| ||| ||||| ||| |||| |||| |||||| ||| ||||| || Sbjct 150 ACAACGTCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGGCGCACGCTCTCGGACTATAA 209 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| |||| || ||||| Sbjct 210 TATCCAGAAGGAGTCCACCCTTCATCT 236 >seq101313 Length=130 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 |||| | ||||| ||||| ||||||||||| || ||||| || ||||| |||| || | Sbjct 130 GCACATCCTGGCATTTTTTGCCGCCAGCGATGGTATCGTGAATGAGAACCTGGCCGTGAA 71 Query 116812 TTTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 |||| | || ||||| ||| | | |||||||| ||||| ||||| || |||||| | Sbjct 70 TTTC-ATGAGTGAGGTACAGTTACCTGAGGCGCGCTGCTTTTACGGTTTCCAGATCATGA 12 Query 116871 TGGAGAA 116877 ||||||| Sbjct 11 TGGAGAA 5 >seq109771 Length=16137 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 ||||| || |||||||||| ||| || || ||||| || || | ||||| || | |||| Sbjct 11162 GACCAACAGCGACTCATCTTCGCAGGAAAGCAGCTTGAAGATGGCCGCACTCTTAGCGAC 11221 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||||||| |||| || || || || |||| Sbjct 11222 TACAACATCCAGAAGGAGTCCACTCTCCACCTCGTCCTGCG 11262 >seq101312 Length=130 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/128 (76%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCG--AG 116809 |||| | ||||| ||||| |||||||||||||| || || ||||| || |||| || | Sbjct 130 GCACATCCTGGCATTTTTTGCCGCCAGCGACGGTATTGTGAACGAAAACCTGGCCGTAAA 71 Query 116810 CGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCC 116869 | || | | ||||||||| || |||| || || || |||||||| || |||||| Sbjct 70 CTTTATGAGC--GAGGTGCAGCTGCCCGAAGCACGTTGTTTCTACGGTTTCCAGATCATG 13 Query 116870 ATGGAGAA 116877 |||||||| Sbjct 12 ATGGAGAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514503038871760