Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq58313 131 1e-25 seq110395 118 9e-22 seq70823 111 1e-19 seq102539 87.8 2e-12 seq107974 82.4 7e-11 >seq58313 Length=1260 Score = 131 bits (144), Expect = 1e-25 Identities = 348/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 44778 TCGAGAATATGCCCTGCGTGC-GCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGAT 44836 |||| | || || || |||| | |||||| ||||||||||| || | || || Sbjct 102 TCGACACCATACCATGTGTGCAGAAGAAAG-CCGAATGGGCGCTGCGCTGGATCAAC--- 157 Query 44837 GAAAAGATAACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTT 44896 || | ||||||| |||| || ||||| ||||| || || ||||| | |||||| Sbjct 158 --AACGGCAACTTTG-CCGAGCGTTTGGTGGCATTTGCTGCGGTTGAAGGCATCTTCTTT 214 Query 44897 TCGGGGAGTTT-TGCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGAC 44955 ||||| ||||| ||| | || || | |||||| ||| ||||||| || ||||| Sbjct 215 TCGGGTAGTTTCTGCT-CTATCTTCTGGCTGAAAAAACGCGGATTGATGCCAGGGCTGAC 273 Query 44956 GTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTA 45015 || || ||||| |||| ||| | || |||||| |||| | | ||||||||| || Sbjct 274 TTTCAGTAACGAGCTGATATCGCGCGATGAAGGTTCGCACTGCGAATTTGCCTGC--CTG 331 Query 45016 CTATAATACGAGAGTCGATCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGA 45075 || | | | | | || | ||| || | | | |||| | | || | || Sbjct 332 CTGT-ACAGCATGCTGGAAAACAAGCTGAGCACTGAGGCGGTCACCAAAATTATTAAAGA 390 Query 45076 AGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAAT 45135 || || | || || | ||||||| | || || ||||| | |||||| | || || Sbjct 391 CGCGGTAGAGATAGAAAAGGAATTTATCAGCGACGCGCTGCCGGTATCGTTAATAGGTAT 450 Query 45136 GAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTT 45195 |||||| || ||||||| |||| ||||||||||| ||||| | || | | | | Sbjct 451 GAACGCCAAACTGATGAGTCAGTATATTGAGTTTGTAGCCGACAGATGGCTGGGCGAACT 510 Query 45196 AAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTT 45255 ||||| || | ||| | | || || || || |||||| | | || ||| | Sbjct 511 GGGCTATCCGAAAGTATACGGTGCATCAAATCCGTTTGATTTTATGGAGATGATATCGCT 570 Query 45256 GGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298 |||||||||| || ||||||||||||||||| ||||| ||| Sbjct 571 ACAGGGCAAAACCAACTTTTTTGAGAAACGCGTGGGCGATTAC 613 >seq110395 Length=10286 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || ||||| || || |||||||| ||| | || ||| |||||| Sbjct 9964 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCG 9905 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| |||||||| |||||||| || ||||| ||||| || Sbjct 9904 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGG 9845 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||||| | |||| ||| || | |||||||||| ||| | ||| || Sbjct 9844 ATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTC 9785 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || || ||||||||| Sbjct 9784 CCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| || | ||| || |||||| Sbjct 9736 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTARTCAGAAAGAGTCCGTCCGTCCTCG 9677 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||| ||||||||| |||| || || ||||| |||||||| |||| Sbjct 9676 AGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCGGGAGGGATGC 9631 >seq70823 Length=785 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||||||||| |||||||||||||| | ||||| ||||| Sbjct 328 ACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCCTGA 269 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG-TCTGT 118648 ||||| || ||||| ||||||||| |||||| || ||||| ||||| |||||| |||| Sbjct 268 AGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGTTCTG- 210 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || ||| || | | | ||| || || ||| ||||| | || | || || Sbjct 209 AATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTCTT 150 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| ||||| || Sbjct 149 CCCTGTGAGGGTCTTGACAAATATCTGTAT 120 >seq102539 Length=187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||||||||| || || |||||||| | ||| || |||||| Sbjct 86 ACCAAGTGGAGGGTAGACTCTTTCTGGATATTGTAATCCGAAAGAGTTCGGCCGTCCTCG 145 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 |||||||| |||||| | |||||||| ||||| ||||| || Sbjct 146 AGCTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCGGGCGG 186 >seq107974 Length=16430 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || || | | ||| | ||||| || ||||||||||| ||||| || || || Sbjct 9517 ACCACCACGCAAACGAAGCACAAGGTGGAGAGTGGACTCTTTTTGGATGTTATAGTCACT 9458 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || || |||||||| || |||||| ||||||| || || |||||||| || Sbjct 9457 CAGAGTTCGACCGTCTTCGAGCTGCTTGCCAGCGAAGATGAGGCGTTGTTGATCGGGGGG 9398 Query 118631 TAT 118633 || Sbjct 9397 AAT 9395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433242446063092