Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq50839 134 5e-27 seq109371 116 1e-21 seq81523 105 2e-18 >seq50839 Length=349 Score = 134 bits (148), Expect = 5e-27 Identities = 198/280 (71%), Gaps = 3/280 (1%) Strand=Plus/Minus Query 3724 GATTGGCTACGACTGGTGGACCGGTGAAGGTGTCACGGCAAAACGCATTGCTGGCGCTCT 3783 ||||||| | |||| ||||||||||||||||| ||||| || ||||| | | | Sbjct 291 GATTGGCGAAGACTATTGGACCGGTGAAGGTGTGACGGCCAAGAAGATTGCCGCCAAGTT 232 Query 3784 GCGCTCCATCGGCAACGATGTCGATGTGACCGTGAACATCAACAGCCCCGGCGGCGACGT 3843 ||| | | | || || |||| | || |||||||| || ||||| ||| | Sbjct 231 GCGTGAGCTGGACGGCGCTG---ATGTTTCGGTTTACATCAACTCGCCTGGCGGTGACAT 175 Query 3844 ATTCGAAGGCCTGGCCATTTACAACCTGCTGCGCGAGCACAAGGGCAAGGTCACGGTGAA 3903 |||||||||||||||||||||||| ||||||||||| |||| ||| | || || || Sbjct 174 GTTCGAAGGCCTGGCCATTTACAACTTGCTGCGCGAGTACAAAGGCGACGTAACCACCAA 115 Query 3904 CATCATCGGCCTGGCTGCCTCTGCCGCCTCTTTCATCGCCATGGCGGGGGATGAAATCCG 3963 || ||| ||||||| |||||||| ||| | ||| |||||| || ||| | | Sbjct 114 GGCTATTGGCATGGCTGCATCTGCCGCGTCTGTGATCTACATGGCTGGTGATACACGTCA 55 Query 3964 CATCGGCCGCGCCGCCTTCCTGATGATCCATAACGCCTGG 4003 || || | || || ||||||||||| ||||||||| Sbjct 54 GATTGGTTCGTCTGCGTTTCTGATGATCCACAACGCCTGG 15 >seq109371 Length=32687 Score = 116 bits (128), Expect = 1e-21 Identities = 179/247 (72%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 30976 CCCCAGCATGGAACCAGAATGTCGGCGTCTGCGACGATGGCGCGGAAGTGTTC--CGTGC 31033 |||||||| || || || |||||||| || || |||| || || |||||| || | Sbjct 1571 CCCCAGCAGGGGACGAGGATGTCGGCCTCGCAGATGATGTCGGTGATGTGTTCGCCGATC 1630 Query 31034 TCAGCGGGCCAAACGGATCATC--CTGCCTGCGAAGCTCTTTCACGTCAGTGGCGCGGTA 31091 || || || |||||||| || || || || | | || |||||| |||||||| || Sbjct 1631 TCGTCG--CCGAACGGATCGTCTACT-CCGGCCAGG-TCGCGCACGTCGGTGGCGCGATA 1686 Query 31092 GCAGAACACATTGCCGACGATGAACCGGTGACC-TCCGTTGCGCAGAGTGAAGCCGCGCC 31150 | |||||| |||||||||||||| || || || || || || ||||||| || Sbjct 1687 GGCGAACACGTTGCCGACGATGAAGCGCTGGCCGCCCCAGGCTTTGA-CGAAGCCGGTCC 1745 Query 31151 ACTTGCGTACCGTTGCATCGTCGATGCTGGCGTCCGCGGTGCTTGGGTTGACCCCAAAAT 31210 ||||||| ||||| || ||||| | ||||||| || ||||| |||||||| || || Sbjct 1746 ACTTGCGCACCGTCGCGTCGTCTTCGGTGGCGTCGGCTGTGCTGGGGTTGACGCCGAAGA 1805 Query 31211 ATGCGTA 31217 | ||||| Sbjct 1806 AGGCGTA 1812 >seq81523 Length=13279 Score = 105 bits (116), Expect = 2e-18 Identities = 118/155 (76%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 48923 TGGCCAGGGAGATCGGATGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGC-GGATGTGAG 48981 |||||| |||| | |||||||| || |||| | ||||||||||||| | || ||| Sbjct 1890 TGGCCAAGGAGCTGAAGTGCCCGGTCATCGCGCTGTCCCAGCTCAACCGCTCGGTG-GAG 1948 Query 48982 TCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAA 49041 ||||| || ||||| ||| || | ||||| ||||| ||||||||||||||||| Sbjct 1949 CAGCGCCCCGACAAGCGGCCGATGATGTCTGACCTGCGCGAATCCGGCGCCATCGAGCAG 2008 Query 49042 GACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 || || |||||| | |||||| | |||||||| || Sbjct 2009 GATGCCGACATCATCATGTTCATCTACCGCGACGA 2043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180203324724456