Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq69314 109 1e-18 >seq69314 Length=381 Score = 109 bits (120), Expect = 1e-18 Identities = 193/276 (70%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 248867 TTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTC 248926 |||| || || || | ||||| ||||||||||| ||||| || | || || || | Sbjct 18 TTGACGGTAAAATTGCCGAACGCCCGCAGCACATGTTTATGCGCGTATCGGTAGGTATCC 77 Query 248927 ACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986 |||| || || || || |||| || | ||||||| | ||||| || |||||| | | Sbjct 78 ACAAAGAAGATATTGAAAGCGCCATCAAAACGTACAACCTGATGAGCGAGCGCTGGTTTA 137 Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGC 249045 |||| || || || ||| | || |||||||| || | ||| | || || || ||| Sbjct 138 CACACGCAACCCCAACGTTGTTTAACGCCGGCACTCCAAAACCA-CAAATGTCATCATGC 196 Query 249046 TTTCTTCTTG-CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC 249104 ||| || ||| ||||| | || ||| | || || ||||| ||||| || ||||| || Sbjct 197 TTT-TTGTTGACCATGAAGGAAGACAGCATTGATGGTATTTACGACACACTGAAACAAAC 255 Query 249105 GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCT 249140 || || ||||| || ||| ||||| ||||| || Sbjct 256 TGCTAAAATTTCGCAAAGCGCCGGCGGTATCGGCCT 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072236537563968