Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq103458 109 1e-18 >seq103458 Length=5285 Score = 109 bits (120), Expect = 1e-18 Identities = 175/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 |||||||| |||||| ||| || || | ||| || || || || |||||||||||| Sbjct 1273 CCTCCAGCGGTCTTGCTGATCATAGCGCAATTCTTGAGTGTGTCGTAGATACCCTCAATG 1214 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910 ||||| |||| | | | | ||| || | | ||| || |||| | || ||| Sbjct 1213 CTATCTTCTTTCATACAGATCAAGAAACAACTGCTCATTTGCGGATGTGGC-GTGCCAGC 1155 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || ||||| || || || || || || || ||| | |||||||||| || ||||| Sbjct 1154 GTTGAACAGGGTCGGAGATGCGTGAGTGAAGTAGCGTTCAGACATGAGATTGTAGGTTTC 1095 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 | || || |||||||| ||||||||||| || || |||||||| ||||||| || Sbjct 1094 CAAAACTCGTTCAATGTCTGAACCGTGAATGCCAACCGCGACACGCATGATCATGTGTTG 1035 Query 95031 AGGGCGCTC 95039 |||||| || Sbjct 1034 AGGGCGTTC 1026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988174077516955