Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq81106 657 0.0 seq18243 165 2e-36 seq31939 84.2 5e-12 >seq81106 Length=13242 Score = 657 bits (728), Expect = 0.0 Identities = 1195/1719 (70%), Gaps = 90/1719 (5%) Strand=Plus/Plus Query 31689 GCGCGTCCGCGGGTCGGCAACGTCGAGGCCCATTGGGAATGCCTTGGTGGCATCGACGTG 31748 ||||||| || ||| | |||||| | | ||||| ||||| || || |||||||| Sbjct 3387 GCGCGTCAACG--TCGCCGGCGTCGACGGCTCCTGGGAGTGCCTGGGCAGCGTCGACGTG 3444 Query 31749 GACCCGGCCGGCCTCCGCGACTTCGAGCGCCTGGCCGGTGTCCCGGGCACCCT-GCTGGA 31807 ||| ||||| | ||| ||||||| |||||||| | ||||| ||| || |||||| Sbjct 3445 GACGAGGCCGCCAACCGAGACTTCGCGCGCCTGGTGCGC-TCCCGCGCAACCACGCTGGA 3503 Query 31808 CCTGTTCACCCGCGACCAATACATCCGCTTCCATG-GAACGGAGCCTCCCGCCGGTTGGC 31866 |||| | |||||| |||||| || ||||| | | ||| |||| || ||| | |||| Sbjct 3504 CCTGATGGACCGCGAGCAATACGTCGCGTTCCACGAGCACG-AGCCGCCGGCCAGCTGGC 3562 Query 31867 GGGAGGCAACCCCGGAGGAAATCCGCCGCGCCGCCGGCGGG--CGCCGACCGGATGCCGT 31924 | ||||| || |||| || |||||| || || || | ||||| ||| | ||| Sbjct 3563 GCGAGGCCACGCCGGCCGACATCCGCAATGCAGC--GCAGAACCGCCGGCCGAACTGCGT 3620 Query 31925 GTTCATCAGCTCGCCCTGCAAAGGCGCCAGCGGCCTGCTGTCGGAGAAGATGAGCCTGAC 31984 |||| | | || ||||| ||| |||||||||||||||| | | ||||||||| Sbjct 3621 GTTCCTGTCGGCCCCGTGCAAGGGCTTCAGCGGCCTGCTGTCGCAAGCCAAGAGCCTGAC 3680 Query 31985 TCCGAAGTACCAGGCGCTGAACGAGTTGACGCTGCGCTGCATCTGGCTGATGGGCGAGGC 32044 | ||||||||||| |||||| | | ||||||||| |||| ||||||| | || || Sbjct 3681 GGCCAAGTACCAGGCCCTGAACCGGCTCACGCTGCGCGGCATTTGGCTGACGCTGGAAGC 3740 Query 32045 ATGGGCTGATGACCCGGTGCCGCTGATCGTCTTCGAGAACGTCCCGCGTCTGGCGAGCCG 32104 ||||| |||||||| ||||||| | ||||||||||||||||| ||||| | || Sbjct 3741 CTGGGCCAATGACCCGCCCGAGCTGATCCTGTTCGAGAACGTCCCGCGCCTGGCCACACG 3800 Query 32105 CGGCCGGCACCTGCTGGACCAGATCAACAGCCTGCTCGGTGGCTTCGGCTACGCCGTGGC 32164 |||||| ||||| || || |||| | | |||| | | || ||||||||||||||| Sbjct 3801 CGGCCGCGCGCTGCTCGATCAAATCAGCGCCATGCTTCGCGCCTACGGCTACGCCGTGGC 3860 Query 32165 GGAAACCACTCACGACTGCGGCGAGCTGGGCGGTCTGGCCCAGTCGCGGAAGCGCTTCCT 32224 || || || ||||||||||||||||||||||| ||||| ||| || ||||||||||| Sbjct 3861 CGAGACGACGCACGACTGCGGCGAGCTGGGCGGGCTGGCGCAGAGCCGCAAGCGCTTCCT 3920 Query 32225 GCTGGTGGCGCGGCACGTCGAGAAAGTGCCGCCCTTCCTGTACGAGCCGGAGAAGAAGAG 32284 ||||||||| || ||| | | || ||||| | | || ||||||||| | | | Sbjct 3921 GCTGGTGGCCCGCCACATTGCCAAGGTGCCCAACCTGCTCTACGAGCCGCCGCGGCTGCC 3980 Query 32285 CCTGCGCGCCGTCGGCGACATCCTCGGCCGCATGCCGCTGCCCGGCGATATCGACGCCGC 32344 |||||||||||||||||| | || ||| ||||| ||||| ||||| | |||| || Sbjct 3981 TCTGCGCGCCGTCGGCGACGTGCTGGGCAAGATGCCCCTGCCGGGCGACCT-GACG--GC 4037 Query 32345 CGGCCCGATGCACCGTGTGCCATCCCTGCAG-TGGAAGACCTGGGTTCGCCTGGCACTGG 32403 |||||| ||||| || ||||| || ||| |||||||||||||| |||||||| | | Sbjct 4038 CGGCCCCATGCATCGCGTGCCGCAGCT-CAGCTGGAAGACCTGGGTGCGCCTGGCCTTCG 4096 Query 32404 TGCGA-GCCGGCAGCGACTGGCGCAGCCTGAACGACCTCGCCGTCGAGGACGGCTACCTG 32462 | ||| ||||||| |||||||||||||| ||| || || || || |||||| ||||| Sbjct 4097 T-CGAGGCCGGCAAGGACTGGCGCAGCCTCAACCGGCTGGCGGTGGAAGACGGCAACCTG 4155 Query 32463 CGCGATCTGATCATCGT-CCCGAAATACCGGGCTGGCTACATGGGCGTGCACGGTTGGAA 32521 ||||| | ||||| || || || | | ||| | ||||||||| || ||| | Sbjct 4156 CGCGACTACCTGATCGTGCCGGAGATGCATCAC-GGCGGCTTGGGCGTGCGCGCGTGGGA 4214 Query 32522 CGACAGCACGGGCACCATCGCCG----GTCGCAGCAGCCCCACGAACGGCGCATTCTCTG 32577 |||||||| ||| | |||| | ||||| | |||| ||| ||||| | || | Sbjct 4215 AGACAGCACCGGCGTCGTCGCGGGCAAGTCGCTG----CCCATGAATGGCGCCTATTCGG 4270 Query 32578 TCGCGGACCCGCGCGCGCCGGCAAACGCCCTGCAATACCAGCAGTACGGCGTGCGCCGCT 32637 |||| ||||| || ||| | || |||||| ||| ||||||||||||||||| | | || Sbjct 4271 TCGCCGACCCTCGTGCGGCCGCGGACGCCCCGCAGTACCAGCAGTACGGCGTCCTGCCCT 4330 Query 32638 GGACCGACACCTCGGGCGCCATCATCGGCGTCAAGTCGCCCGGCCAAGGCACGTACTCCG 32697 || |||| | |||||||||||||||||||||||||| || | || |||| | || Sbjct 4331 GGGGCGACGCAAGCGGCGCCATCATCGGCGTCAAGTCGCCAGGGAAGGGAACGTTCAGCG 4390 Query 32698 TCGCCGATCCCCG------CGGCCAG----AG-TTTCG-GCAAGTACCCGGTCACCGACT 32745 ||||||| || || ||||| | || |||| | ||||| || | Sbjct 4391 TCGCCGACCCACGCCACGCCGGCCCGTCCAAGCATTCGAACGAGTACTGCATCGTTCGGT 4450 Query 32746 GGGACGGCCCAGCCGGCACCGTGATC-GCGGCCAGTACTACCGGCCAGGGTGCATTTGCT 32804 |||| || | || | | || | | ||| ||| | ||||||||| ||| Sbjct 4451 GGGATCGCTCCGCGCGTGCGGTCACCAGCGCCCACGGC-ACCGGCCAG---------GCT 4500 Query 32805 GTCGCGGACCCGCGCCACCGTGGCCCTGCCAAACACTCTAACGAGTTCCGCATCGTGCCT 32864 ||||| ||||||||| ||| ||||| | ||| | ||| | || ||| | || Sbjct 4501 GTCGCCGACCCGCGCAACCTCGGCCCCG------ACTTCGCCAAGTACGGCGTCGCGGCT 4554 Query 32865 TGGGACCGCCACGCACAAGCGGTCACCAGTG------CCCATGGCACAG--GCCAGTG-C 32915 ||||| |||| || |||| | ||| | || |||| | ||| || | Sbjct 4555 TGGGAGGGCCAAGCGGGCACGGTGATCAGCGGCAGCACCAGCGGCAACGGTGCCTATGCC 4614 Query 32916 GTCGAAGACCCGCGCGTGCTCA-GCCGGACGAAGGGAGACCCGTATCTCACTGGCGGCCA 32974 |||| ||||||||| || | | | | | | | | || || | ||||| || Sbjct 4615 GTCGCCGACCCGCGCTCCGGCATGGCTGGTG-ATCGTGCTGCCTACCTGAGCGGCGGTCA 4673 Query 32975 CTACGGCGTAGTTGGGTTCGACCAATCCGCCGGCGCGGT---GTCGGCCAGTGCGCGGCA 33031 |||||||||| | || || ||||||||||||| ||||| || | || Sbjct 4674 CTACGGCGTATTGCCGTGGGAGGGCACCGCCGGCGCGGTCAGCTCGGC---GGCCTGCCA 4730 Query 33032 CGACAACGGTCGATGGAGCGTGGCCGATCCGCGCATGCCGAAGGCGAACGACCGGCTGAC 33091 ||||||||| || ||| || || || ||||||||||| ||||||||||||| ||| Sbjct 4731 CGACAACGGCCGCTGGTCGGTCGCGGACCCGCGCATGCCAGAGGCGAACGACCGCCTGGT 4790 Query 33092 CTGCATCATCCAGTCGCTGGATGGCACCTGGCACAGGCCGTTTACCACCCTGGAACTCGC 33151 | ||||| | ||| |||||||||||| | ||||| ||||| |||||||| || Sbjct 4791 CGCGCGCATCCGTGCAGAGGACGGCACCTGGCACCGACCGTTCACCACGCTGGAACTGGC 4850 Query 33152 CGCGCTGCAGAGCTTGGTCGACCCCGAAGAGC------AG---------TTGGTCCTCGA 33196 ||||||||||||| || |||| ||||| | | || || | ||| || Sbjct 4851 CGCGCTGCAGAGCCTGTTCGATCCCGAGAACCCAATCGAGGCCGCGGCCTTCGGCCTGGA 4910 Query 33197 CGGCCTGAGCGA-CAGCGACTGGCGCGAGCGGATCGGCAATGCGGTTCCGCCGGCTGCGG 33255 |||| |||||| ||| | ||||||||||| |||||||| || || |||| ||| Sbjct 4911 CGGCACGAGCGATCAGTTA-TGGCGCGAGCGCATCGGCAACGCCGTGCCGCGCAAGTCGG 4969 Query 33256 CCGAGGCCATCGCCGGCGTGATGGGCACCACCCTGTTGTTGGCTGAGGCTGGCGAGACCT 33315 | ||||| |||| || |||| ||| ||| || |||| || |||||||| | Sbjct 4970 CGCGCGCCATGGCCGACGAGATGCTGCGCACGCTGATGCTGGCCGACATGGGCGAGACGT 5029 Query 33316 TCCTGCTCAGTAGCACGCCGATCTGGGTGCGTCAGGTCG 33354 || ||||| ||||||||||||||||||| || || Sbjct 5030 TCGCACTCAGCGCTACGCCGATCTGGGTGCGTCCGGCCG 5068 Score = 96.9 bits (106), Expect = 8e-16 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 32805 GTCGCGGACCCGCGCCACCGTGGCCCTGCCAAACACTCTAACGAGTTCCGCATCGTGCCT 32864 ||||| ||||| |||||| ||||| |||| || || ||||||| | ||||||| | Sbjct 4390 GTCGCCGACCCACGCCACGCCGGCCCGTCCAAGCATTCGAACGAGTACTGCATCGTTCGG 4449 Query 32865 TGGGACCGCCACGCACAAGCGGTCACCAGTGCCCATGGCACAGGCCAGTGCGTCGAAGAC 32924 ||||| ||| ||| | ||||||||||| ||||| ||||| |||||| |||| ||| Sbjct 4450 TGGGATCGCTCCGCGCGTGCGGTCACCAGCGCCCACGGCACCGGCCAGGCTGTCGCCGAC 4509 Query 32925 CCGCGC 32930 |||||| Sbjct 4510 CCGCGC 4515 >seq18243 Length=2233 Score = 165 bits (182), Expect = 2e-36 Identities = 280/402 (70%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 1550 CCGAACCCACCAGCGTTCTGCGGCACCACCCCCATCAGCTGCGGATAGACCCGCAGGCCG 1609 ||||| || || ||||| ||||| | |||| |||||| || ||||| | || Sbjct 468 CCGAAGCCGCCGGCGTTGGCGGGCACGATGCCCAGCAGCTGGGGCGGCACCCGATGCGCG 409 Query 1610 GCGAGCTGGTCGTCGCGGCTGATGTTCTTGATTGAGCCGAACTCGTCCTTGGCCGCCACC 1669 || || ||||||||| | |||||||||| | | |||||||||||||| || | | Sbjct 408 GCCAGGACGTCGTCGCGCGAGGTGTTCTTGATCCCGACAAACTCGTCCTTGGCGGCGATC 349 Query 1670 TCGCTGACCGGAATCAGTTGGATCCCCTCCTTCTTCCCGTTCGGCGCGTAGACGAACAGG 1729 ||||||| |||||| | ||||| |||| || | |||| || | || || ||| ||| Sbjct 348 TCGCTGATCGGAATGATCTGGATGCCCTTCTCATGCCCGCCTGGTGAGTGGATGAAGAGG 289 Query 1730 TTGCGGAAATTGCCAGGCCCCTT---CGCGGTCTTCAGCGCCGTGCGCAGCGCGTCGATG 1786 || ||||| || || |||||||| | || | || |||| || | || |||| Sbjct 288 TTCCGGAAGTTCCCCGGCCCCTTGCCCTCGCGCATCTTCGCCTTG---ATGGCATCGACC 232 Query 1787 TCTTCCTCATTC-TGTGCGGCGTCGGTCATGTAGAGGATGAAGCCGGCGTGGCTGCCGTT 1845 ||||||| || ||| | | |||||| || ||||| |||||| |||| |||||| Sbjct 231 TCTTCCTGGCTCATGTTCTG-GTCGGTGCTGCGCAGGATAAAGCCGACGTGCGAGCCGTT 173 Query 1846 GTTGTAGTACTTACGCCGGAACAGCGTGGCCGACTCGTTCAGCAGGGCGCTCTGTAGGGC 1905 | ||||||||| || |||||||| || || | |||||| || | || ||| ||||| Sbjct 172 GAGGTAGTACTTGCGGCGGAACAGGGTCGCGGCCTCGTTGAGGAACGCTGACTGCAGGGC 113 Query 1906 GCAGAACCACTCCGGCACTCCGTAGATTTCCTGATTGATGTC 1947 || | | || || | ||||||| | ||| |||||||| Sbjct 112 GCCAAGGTATTCGGGTAGGCCGTAGACGTTCTGGTTGATGTC 71 >seq31939 Length=505 Score = 84.2 bits (92), Expect = 5e-12 Identities = 250/380 (66%), Gaps = 13/380 (3%) Strand=Plus/Plus Query 3624 GAAGATGTGCGCTTGGGCCTTGCTGGCCGACAGGAATATCTGGTTGCGCCCCGTTTCCAG 3683 |||| | |||| |||||||| |||||||||||| |||| |||| | || || || || Sbjct 113 GAAGTTCAGCGCCTGGGCCTTCGAGGCCGACAGGAAAATCTTGTTGTGACCGGTCTCGAG 172 Query 3684 CGCGTCGATCAGCGCCTCGCGGGCGAAGTAGAACGTGGCGCCGATCTGCCGCGACTTGAG 3743 |||| || || |||||| ||||| ||| | ||| || || ||||| || | ||| || Sbjct 173 CGCGGTGACCAACGCCTCACGGGCAAAGAACTCCGTTGCCCCAATCTGGCGGGCCTTCAG 232 Query 3744 AATCACGCGGGTTCGC--TGATTACCCGCGCGGTACCAGTCTTTCTGGTAGTCGAAGCAA 3801 |||| || || ||| || | | | | | |||||| ||||| |||||| Sbjct 233 GATCATCCGCGTGCGCAGCGACGAGCTGTTCAG--CCAGTCGAGCTGGTGTGGGAAGCAC 290 Query 3802 C---CGTCGAGGAAGGCCTCGACCAGTTTCTCGGTCAGTTC--CTCACTGAT-GTCGTTG 3855 | | ||||| ||||| | |||| || | | || || | || || | | Sbjct 291 CACGCCTCGAG---GGCCTTGCGAAGTTCGACGACCTGGTCGGCTGAGAAATGGTTGCCG 347 Query 3856 CGCTTCGGCTTGCGCTTGGGACCTTCGTTACGCTTGGCAAGCTCGGGGTTCAGGTCGGTT 3915 ||| ||||| |||||| || |||| || ||| | | ||| | ||||| || Sbjct 348 CGCGCCGGCTCCTTCTTGGGCGCTGCGTTGCGGGCGGCGATGTTCGGGCTGAGGTCCGTC 407 Query 3916 TCCGTACCACCGCCCTGGTAGCGCTGGATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGC 3975 || || || || | ||| |||||||||| || ||| ||||| || | ||| Sbjct 408 TCGGTCCCGCCATCAATGTACTTGCGGATCCGCGCGACGCCCTCGAGCTGGCGCTTGAGC 467 Query 3976 AGGTCGATTTCCTTGTAGTC 3995 || |||||||||||| |||| Sbjct 468 AGATCGATTTCCTTGAAGTC 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113584212374204