Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq109371 360 7e-95 seq109454 212 2e-50 seq40144 163 1e-35 seq36499 132 2e-26 seq107677 96.9 1e-15 seq92942 82.4 3e-11 >seq109371 Length=32687 Score = 360 bits (398), Expect = 7e-95 Identities = 437/584 (75%), Gaps = 31/584 (5%) Strand=Plus/Plus Query 31340 CCACTCGCCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCGCGCAG 31399 |||||||||||| |||||||| | |||| ||||| ||| || ||||||||||||||||| Sbjct 5506 CCACTCGCCCCACTGCTTGAAGTGAAACGCCACGCTGGCCGCCGCGCACTGGTCGCGCAG 5565 Query 31400 CGAGCGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGAT 31459 | ||| |||||| ||| |||||||| || ||||| | ||||| ||||| ||| |||| Sbjct 5566 GGCGCGGGCCCAGCTGGGGTGCATCGGACGCGCGCCAGGCCCGCTCTCGCCTCCGACGAT 5625 Query 31460 CACCCAATGTAGGCCGCCGTCGGCTGGCCGGCGTAGTTCGAGCTGGCGCTTGCCGCCGTG 31519 | ||| || | |||||||||||| ||| ||| || || | |||||||||||| ||||| Sbjct 5626 GATCCAGTGAATGCCGCCGTCGGCCGGCTTGCGCAGCTCCATCTGGCGCTTGCCTCCGTG 5685 Query 31520 CGTACGAAAATTGCCGGTGGGCTCGCTGTAGATGTGGAAGCGAAGGTCAACCGGCCCGAG 31579 ||| || | ||||| |||||||||||| ||| ||||||||| ||||| || ||||| | Sbjct 5686 CGTGCGCCAGTTGCCCGTGGGCTCGCTGAAGAGGTGGAAGCGGAGGTCCACAGGCCCCAT 5745 Query 31580 CAAAGGCTCCATCGACAGGAAGCGCACGCGAGCGGGCACTGCGAGCAGCTTCGGAATGTC 31639 || |||||||| |||||| |||||||| || ||| | || ||||||||||| ||||| Sbjct 5746 CAGCGGCTCCATGCTCAGGAACCGCACGCGCGCCGGCGCGGCCAGCAGCTTCGGGATGTC 5805 Query 31640 GCGGTCGGCCTCGGCCTGATTCACGATCGTCGCGCCGAGCCAGACATGCGGCCACGGCCA 31699 ||||||||| || ||||| || |||| || ||||||| ||| || | ||||| || | Sbjct 5806 GCGGTCGGCTTCTGCCTGGTTGACGACTGTGGCGCCGATCCAAACGTTGGGCCAAGG-CG 5864 Query 31700 CTCACGCTCATC--GCGCATGATGC-----------TGC-CGA-GGACGC--------TG 31736 || || || || || |||||| ||| ||| | ||| | Sbjct 5865 CTGCCG-TCGTCCACGGCTTGATGCCCGGGTTGTAGTGCTCGACCGTCGCAGAGGCCTCG 5923 Query 31737 GAAATCATATCCCGCGCGTTTCCGATTCGCTTCGTCAGTAGCAGCCAGTCGAGATTTGGC 31796 | ||||| ||| ||||| ||||| |||||||||| || |||||||| |||| || Sbjct 5924 GCGATCATGGGCCGAGCGTTGCCGATGCGCTTCGTCAACAGGAGCCAGTCCAGATACGGT 5983 Query 31797 GT-GTTGCTGATCAAATCGAAGAGAT-CGACTCGCCACATCGGATAG-ACCGCGTTGTCG 31853 || | ||| ||||| |||||||| ||| |||||| || || | ||| |||||||| Sbjct 5984 GTCGCTGC-GATCAGGCAGAAGAGATGCGA-GCGCCAC-TCCGACGGCACCTCGTTGTCG 6040 Query 31854 AACACGTCCGCAAGCGACGAGCAAAAGACGCGCTGGCGCCGGCC 31897 |||||||| || ||||| | ||| |||||||| ||| ||||| Sbjct 6041 AACACGTCAGCCAGCGAGGCGCAGAAGACGCGGAAGCGGCGGCC 6084 Score = 100 bits (110), Expect = 1e-16 Identities = 182/261 (70%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 45616 TGATGGCCAAAAACTCAATCGACGTCTACGGGGCGTCGGGCAAGGGCAACGTCCTTTCGA 45675 ||||||| || ||||| ||||| | ||| || || ||||||| ||||||||| | | Sbjct 18169 TGATGGCAAAGAACTCGATCGATGCCTATGGCGCCCTGGGCAAGACCAACGTCCTGTTGT 18228 Query 45676 TGGACCCTGACAAGCTGACGCTCGTCACGGACCCGAAGCACCCGCTGTACGACCGGCGCG 45735 | ||||| ||| | ||| ||| || || ||||| || ||| |||||| ||| ||||| Sbjct 18229 TCGACCCGGACGACCTGGTGCTGGTGACTGACCCCAACCACGCGCTGTTCGATGAGCGCG 18288 Query 45736 TACATCAGGCGCCGAACCCGAAGACGGTTCGGAACTATCGCG-CGCAGGGCGTGCTTGAG 45794 | | | | ||| | | ||| | ||| | |||| ||| | || ||||||| | | Sbjct 18289 TTAACCTGCCGCTGGTCGAGAACATGGTGCTGAAC-ATCATGGCGATCGGCGTGCATACG 18347 Query 45795 CCGGTGCTCT-TCTACAAAGACCCGGAGACGGGCGAGAACCTCGTGATCGACGGCCGTCG 45853 || | ||| || ||| ||||||||||||||| ||| || || | | |||||| | Sbjct 18348 CCCAT-CTCGATCACCAAGGACCCGGAGACGGGCCAGACGCTGGTTGTGGCCGGCCGGCA 18406 Query 45854 CCGCGTGATCAACGCGCGCGA 45874 ||||||| || | ||||| Sbjct 18407 GCGCGTGAAGCACACCCGCGA 18427 >seq109454 Length=55839 Score = 212 bits (234), Expect = 2e-50 Identities = 186/232 (80%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 43831 TGAAGGTCAAAGATCTGATGGGCCAGCCGTGGCGTCTTGCGTTTGCATTGCAGGATGCCG 43890 ||||| ||||| ||||||||||||| ||||| | || || || ||||||| | | Sbjct 34714 TGAAGCCGAAAGACATGATGGGCCAGCCCTGGCGCGTGGCCTTCGCGCTGCAGGACGATG 34655 Query 43891 GCTGGTATCTCCGACAGGACATCATCTGGCACAAGCCGAACCCGATGCCCGAGAGCGTGC 43950 | |||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||||| || Sbjct 34654 GTTGGTGGCTCCGTCAGGAAATCATCTGGCACAAGCCCAACCCGATGCCAGAGAGCGCGC 34595 Query 43951 GCGACCGCTGCACTAAGGCACACGAATATCTGTTTCTGCTTTCGAAGAGCGAGCGCTACT 44010 ||||||||||||| ||||| ||||| | | |||||||| |||||| |||| |||| Sbjct 34594 GCGACCGCTGCACCAAGGCGCACGAGCAGATATTTCTGCTGTCGAAGTCGGAGCAGTACT 34535 Query 44011 ACTACGACTTCCACGCGATGCAGGAGCCTGTGAGCGGTGGTGCTCATGCACG 44062 |||||||||| |||| ||||| ||||| |||||||| || || ||||| || Sbjct 34534 TCTACGACTTCGACGCAATGCAAGAGCCGGTGAGCGGCGGCGCACATGCGCG 34483 Score = 152 bits (168), Expect = 2e-32 Identities = 113/132 (86%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 31340 CCACTCGCCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCGCGCAG 31399 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 48014 CCACTCGCCCCATTGCTTGAACAGGAACGGCACGCCGGCGGCCTCGCACTGGTCGCGCAG 47955 Query 31400 CGAGCGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGAT 31459 || |||||| |||| ||||||| || ||| ||||||||||||||||||| ||| Sbjct 47954 GTCTCGGGCCCAGGCGGGGAGCATCGGCCGCGCGTGGTGGCCGCTTTCGCCGCCGCAGAT 47895 Query 31460 CACCCAATGTAG 31471 |||||| || || Sbjct 47894 CACCCAGTGCAG 47883 Score = 96.9 bits (106), Expect = 1e-15 Identities = 189/275 (69%), Gaps = 16/275 (6%) Strand=Plus/Minus Query 43459 GGCTTGACCGTTCGCACCGC----GGAGACTGCCGCGACCTGATGCGCGCGATGGCCGCC 43514 ||| |||| ||||||| | || ||||||||||| | ||||| || || ||| Sbjct 35135 GGCGTGACGGTTCGCATCCTTCAGGGCGACTGCCGCGAGGTTCTGCGCACGCTGCCCGAT 35076 Query 43515 GACGGCGTGCGCGTGCAGACGATCGTCACGTCGCCGCCGTACTGGGGCCTGCGCTCGTAC 43574 || |||| ||| | ||||||| ||||||||||||||||||||||| ||| Sbjct 35075 GAATCGGTGCAT-TGCTG-----CGTCACGAGCCCGCCGTACTGGGGCCTGCGCTCCTAC 35022 Query 43575 CTGCCCGACGGGCACCCGGACAAGCACCGCGAGATCGGCCAGGAACCGACGCTGCGCGAG 43634 |||| || || ||||| |||||| | ||||||||| || || ||||||| || Sbjct 35021 TTGCCGGAGGGCCACCCCAACAAGCCGCTGGAGATCGGCAGCGAGCCCACGCTGCAGGAA 34962 Query 43635 TTCATCAACACGCTGGTCGGCGTGTT---CGATCTGGCGCGCGCGCTGCTAGCCGACGAT 43691 | | |||| |||| | ||| || ||| || || | |||| |||| || Sbjct 34961 TGGGTGGCCACGATGGTGGACGTCTTCCGCGAGGTGCGTCGAGTACTGC-GGCCG--GAC 34905 Query 43692 GGCACGCTCTGGCTGAACATGGGCGATGCCTATGC 43726 |||||||| ||||| ||| ||||||| || || || Sbjct 34904 GGCACGCTGTGGCTCAACCTGGGCGACGCTTACGC 34870 >seq40144 Length=213 Score = 163 bits (180), Expect = 1e-35 Identities = 129/155 (83%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 33771 CGCCAGCCAACAATACGGCGGGCGAACACGTCGATCACGAATGCCACGTACAGCCAGCCT 33830 |||||||| || || || ||| ||||||||| | ||||| |||||||| | |||||| Sbjct 176 CGCCAGCCCACGATGCGCCGGCTGAACACGTCCACGACGAAGGCCACGTAGACCCAGCCC 117 Query 33831 TGCCATGTCGAGACATACGTAAAATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTTG 33890 ||||| ||||||||||| || || ||||| ||||| |||||||||||||| || |||||| Sbjct 116 TGCCAGGTCGAGACATAGGTGAAGTCCGAGACCCACAGCTGATTCGGTCGCTCGGCCTTG 57 Query 33891 AACTGCCGGTTGACTCGGTCCAGCGGGCGCGGCGC 33925 || ||||||||||| || |||||||||| ||||| Sbjct 56 AAATGCCGGTTGACCCGATCCAGCGGGCATGGCGC 22 >seq36499 Length=515 Score = 132 bits (146), Expect = 2e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 31335 GGTGCCCACTCGCCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCG 31394 || ||||||||||||||||||||||| || || ||||||||||| || ||||| || ||| Sbjct 400 GGAGCCCACTCGCCCCATTGCTTGAAAAGAAATGGCACGCCGGCAGCCGCGCATTGATCG 341 Query 31395 CGCAGCGAGCGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCG 31454 || || || |||||||| || || |||||||| || ||||| | |||| |||||| ||| Sbjct 340 CGGAGTGATCGAGCCCACTCTGGGTGCATCGGCCGTGCGCCATCGCCGGATTCGCCCCCG 281 Query 31455 GCGATCACCCAAT 31467 ||| ||||||| Sbjct 280 ACGACGACCCAAT 268 >seq107677 Length=43338 Score = 96.9 bits (106), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 15/186 (8%) Strand=Plus/Minus Query 33311 CGGACTGAACCGCACCGGGAATCGTGGAGGCTGGTTGGTTTAAGTTAATGCGGACACGTC 33370 ||||||||||||| |||||||| | |||||| ||||||||||| | | ||||| Sbjct 41635 CGGACTGAACCGCCCCGGGAATTGCGGAGGCCCGTTGGTTTAAG-TCAGACGGAC----- 41582 Query 33371 AGCGGCATTTC---TGAGTTGTCTGTAGTAGTTTGCCTCAGCTTCAGCGGGCGGGATATA 33427 ||||| | | | |||||| | |||||| |||||| || || || |||| || Sbjct 41581 -GCGGCCTGACCAGCGCGTTGTCGATGGTAGTTGGCCTCAAACTCGGCCGGAGGGACGTA 41523 Query 33428 GCCGAGCGGTTCCATCAGCCGATGATGGTTGTACCAGGCGACCCATTCCAGCGTTGCCAG 33487 ||| ||||||| |||| ||||| |||||| |||| | ||||| |||||| || || Sbjct 41522 GCCCAGCGGTTTCATCGATCGATGGTGGTTGAACCA----AGCCATT-CAGCGTCGCAAG 41468 Query 33488 TTCGAC 33493 ||| || Sbjct 41467 TTCTAC 41462 >seq92942 Length=375 Score = 82.4 bits (90), Expect = 3e-11 Identities = 130/185 (70%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 34180 GGTAGCCCGACGGGGCAATCCGCAAGACCTTGCAGATCGGCTCGACCCCGAAGGTGTCGC 34239 ||||| || ||||| ||| |||| ||| |||||||||||||||||| | | | | Sbjct 146 GGTAGGTGGATGGGGCGATCGGCAAAACCCGGCAGATCGGCTCGACCCCATATGATCCCC 205 Query 34240 GATGCTGATCAATGAAGGCCTTCAGGACTTGAAACGGCGGTCGAGCTCCGCCTGAGCGAA 34299 | || | ||| || || || ||| |||||| ||||||||||||||||||| || || Sbjct 206 GGTGATCATCGATAAACGCGATCATCGCTTGAACGGGCGGTCGAGCTCCGCCTGGGCAAA 265 Query 34300 AAACGCGCTCGCCAGTTTG---AGAATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCG 34356 | | ||| ||| ||| | |||||||||| | || || ||| | ||| || Sbjct 266 ATAAGCGGAAGCC---TTGCGCAATATCTCGTTGGCTTGCCGAAGCTCCCGGTTCTCACG 322 Query 34357 CTCCA 34361 ||||| Sbjct 323 CTCCA 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170446625597270