Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq81106 324 5e-84 seq109536 131 6e-26 seq107518 120 1e-22 seq93215 118 4e-22 seq107552 111 6e-20 seq32423 107 7e-19 seq104720 95.1 4e-15 seq109454 87.8 7e-13 seq90211 86.0 2e-12 >seq81106 Length=13242 Score = 324 bits (358), Expect = 5e-84 Identities = 512/721 (71%), Gaps = 16/721 (2%) Strand=Plus/Minus Query 43171 AGTCCCGCAGGTTGCCGTCCTCGACGGCGAGCTTGTTGAGCGAGCGCCAATCCGAGCCAG 43230 |||| |||||||||||||| || || || ||| |||||| |||||| ||| ||| | Sbjct 4162 AGTCGCGCAGGTTGCCGTCTTCCACCGCCAGCCGGTTGAGGCTGCGCCAGTCCTTGCCGG 4103 Query 43231 CCTCGACGAAGGCAAGGCGCACCCACGTCTTCCA-CTGCAGCGAAGGAACACGATGTAGG 43289 ||||||||||||| ||||||||||| |||||||| ||| ||| || || ||||| | | Sbjct 4102 CCTCGACGAAGGCCAGGCGCACCCAGGTCTTCCAGCTG-AGCTGCGGCACGCGATGCATG 4044 Query 43290 GGGCCGCCTGCAGGGTCGCCTGGCAGCGGCAGTTTCTCAAGGATTTCGCCGACGCCTCGC 43349 |||||| | | ||||||| ||||| |||| || | || | ||||||||| | ||| Sbjct 4043 GGGCCGGCCGTCAGGTCGCCCGGCAGGGGCATCTTGCCCAGCACGTCGCCGACGGCGCGC 3984 Query 43350 AGGCGCTTCTTTTCGGGCTCGTAAAGGAACGGAGGCACAGTCGGTTCGTGGCGCGCAACA 43409 || || | |||||||| || | ||||| | | |||||| || || Sbjct 3983 AGAGGCAGCCGCGGCGGCTCGTAGAGCAGGTTGGGCACCTTGGCAATGTGGCGGGCCACC 3924 Query 43410 AGCAGGAAGCGCTTGCGGCTCTGACCCAAACCGCCGATCTGACCGCAGTCGTGGGTGGTC 43469 ||||||||||||||||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct 3923 AGCAGGAAGCGCTTGCGGCTCTGCGCCAGCCCGCCCAGCTCGCCGCAGTCGTGCGTCGTC 3864 Query 43470 TCGGCGACGGCGAAATTGTAGCTCCGCAGCAGGGCAATGATCTGATCGAGCAACTTGCGG 43529 ||||| |||||| | |||| || |||| ||| |||| |||||||||| | |||| Sbjct 3863 TCGGCCACGGCGTAGCCGTAGGCGCGAAGCATGGCGCTGATTTGATCGAGCAGCGCGCGG 3804 Query 43530 CCACGGTTCATGATGCGCGGCACATTTTCGAAAATGATCAGCTTGGGAAGCTTGTCCTTG 43589 || || | | |||||| || || ||||| | |||||||| || || ||| ||| Sbjct 3803 CCGCGTGTGGCCAGGCGCGGGACGTTCTCGAACAGGATCAGCTCGG---GCGGGTCATTG 3747 Query 43590 ---AAGGCTTCCAGCATCAGCCACACGCCGCGCAACGTCAGCCGATTGAGGGCCTGATAC 43646 ||||||||||| ||||||| | |||||||| ||| ||||| || |||||||| ||| Sbjct 3746 GCCCAGGCTTCCAGCGTCAGCCAAATGCCGCGCAGCGTGAGCCGGTTCAGGGCCTGGTAC 3687 Query 43647 TTGGCGGTCGCGCTCGACTGCTCG-GACAGCAAGCCGGAGAAACCTTTGCATGGAGCGGA 43705 ||||| ||| |||| ||| | ||||||| |||| ||| || ||||| || || || Sbjct 3686 TTGGCCGTCAGGCTC-TTGGCTTGCGACAGCAGGCCGCTGAAGCCCTTGCACGGGGCCGA 3628 Query 43706 CAAGAACACG-ATATCGGGGAACTCGCCATGCGCTGCGCGCCGAATGTCGTCCGGTACCG 43764 || ||||||| | |||| | | |||||||| || |||||| |||| | Sbjct 3627 CAGGAACACGCAGTTCGGCCGGC-GGTTCTGCGCTGCATTGCGGATGTCGGCCGGCGTGG 3569 Query 43765 CCTGCTGCCAATCGGGATCAGGGTCGCGACTGTGAAAGGCCCGGTACTGCTCCAGGTCGA 43824 ||| |||| || || ||| | ||| || || ||| ||||| |||| | Sbjct 3568 CCTCGCGCCAGCTGGCCGGCGGCTCGTGCTCGTGGAACGCGACGTATTGCTCGCGGTCCA 3509 Query 43825 ACAGATCGAGC-AGGGTGC-CGGGAACGCCGGCAAGGCGCGTGAAATCACGGATGGCCGC 43882 ||| || ||| || ||| ||||| ||| | ||||||| ||| || ||| |||| || Sbjct 3508 TCAGGTCCAGCGTGGTTGCGCGGGAGCGC--ACCAGGCGCGCGAAGTCTCGGTTGGCGGC 3451 Query 43883 C 43883 | Sbjct 3450 C 3450 Score = 80.6 bits (88), Expect = 1e-10 Identities = 102/136 (75%), Gaps = 12/136 (9%) Strand=Plus/Plus Query 54490 CTCGACTGGGTCATAGCCGGCGGCGAGAGCGG---AAAGCTTGCCCGCCCGATGCACCCG 54546 |||||||||||||| |||||||||||||| ||| || || |||||||||||| Sbjct 8758 CTCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAG---GCGCGTCCGATGCACCCG 8814 Query 54547 GAATGGGTGAGGGGCATCCGCGAAGCCTGCAGCGCGACCGGC---GTTCCGTTCCTGTTC 54603 | ||||| | ||| ||||||| | | ||||| ||| | || |||||| ||||| Sbjct 8815 GCATGGGCCCGAGGCCTCCGCGA--TCAG-TGCGCGGCCGCCAAGGTGCCGTTCTTGTTC 8871 Query 54604 AAGCAATGGGGCGAGT 54619 ||||| ||||| |||| Sbjct 8872 AAGCAGTGGGGTGAGT 8887 >seq109536 Length=21924 Score = 131 bits (144), Expect = 6e-26 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 44067 ATCATGCCGAGCGCTGCGAGGTAGGTGTCGAGGATGGCCTCTTGCTCCATCCGCTCGTCG 44126 |||||| |||| || || ||| ||| || | ||||| || || |||||| | Sbjct 2160 ATCATGTCGAGGGCGTTTAGATAGAGGTCAAGCAACGCCTCCTGTTCTTCGCGCTCGGCC 2101 Query 44127 GTGTCCTGCTTGCGCAGCGAGATCACCTTCCGCAGGATCTTGGCATCGAAGCCGGTCCCC 44186 ||||||| || || | ||| ||| | |||||||||| ||| ||||||| | Sbjct 2100 TTGTCCTGTTTCCGGATACGGATTACCCGCTTGAGGATCTTGGTGTCGTAGCCGGTGCTT 2041 Query 44187 TTTGCCTCGCCGTACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCAAG 44246 ||||||||| ||| |||||||||||||||||||||| | || |||||||||||| | | Sbjct 2040 TTTGCCTCGGAGTAGACATCCTTGATGTCGTCGGCGAGCGCCTGCTTTTCTTCCTCAAGG 1981 Query 44247 CGTTCGATGCGGTGGATGAAGGCCTTGAGCTGATC 44281 ||||||||||| | || ||| ||||||||| || Sbjct 1980 CGTTCGATGCGCTCGACGAATTGCTTGAGCTGGTC 1946 Score = 80.6 bits (88), Expect = 1e-10 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 51685 TGGCAGCCATCTATCCATATGCCCCGCTGGGCTTCGCGCCTTACCCTGATCGTGACCGAC 51744 ||| || | || |||||| || ||||| | || ||| | | ||||||| || || | Sbjct 5782 TGGAAGTCCTCGATCCATCTGACCCGCAGAGCGTCGAGAATCACCCTGAATGTCGCCACC 5841 Query 51745 GTTCGCGTCGAGCGCCTGCAGGATATCAGCGAGGCCGACGCAATCGCCGAGGGC 51798 || ||| |||||||| |||||||||||||||| || ||||| |||| || ||| Sbjct 5842 GTCCGCATCGAGCGCTTGCAGGATATCAGCGAAACCAACGCAGTCGCGGAAGGC 5895 >seq107518 Length=40692 Score = 120 bits (132), Expect = 1e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 44066 GATCATGCCGAGCGCTGCGAGGTAGGTGTCGAGGATGGCCTCTTGCTCCATCCGCTCGTC 44125 |||||||||||| || ||| || ||| || | || || ||||| || ||| | Sbjct 6961 GATCATGCCGAGTGCATTGAGATACAGGTCCAGCAACGCTTCCTGCTCTTCGCGTTCGGC 7020 Query 44126 GGTGTCCTGCTTGCGCA-GCGAGATCACCTTCCGCAGGATCTTGGCATCGAAGCCGGTCC 44184 | ||||||||||| | ||| ||| |||| | ||||||||||| ||| | |||||| Sbjct 7021 CTTATCCTGCTTGCGGATGCG-GATGACCTGCTTCAGGATCTTGGTATCATATCCGGTCG 7079 Query 44185 CCTTTGCCTCGCCGTACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCA 44244 ||| || ||| || ||||||||||| ||||||||||| |||| ||| ||||| |||| Sbjct 7080 ACTTGGCTTCGGAATAGACATCCTTGATATCGTCGGCGATCGTCTGCTTCTCTTCTTCCA 7139 Query 44245 AGCGTTCGATGCGGTGGATGAAGGCCTTGAGCTGATCG 44282 || ||||| || | || || ||| ||||||||| Sbjct 7140 GTCGCTCGATCCGCTCGACAAATTGCTTCAGCTGATCG 7177 >seq93215 Length=670 Score = 118 bits (130), Expect = 4e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 48648 CCGAACCCAATCGACACGCAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATCATCGGC 48707 || ||||| |||||| ||| |||||||| ||||| || | |||||||| || | ||| Sbjct 620 CCCAACCCCATCGACCTGCATGTCGGCGCGCGCATTCGCATGCGCCGCAAGATTCTGGGC 561 Query 48708 ATGAGCCAGGAGACGCTGGCTGCGCATCTCGGCATCACCTTCCAGCAGGTCCAGAAATAC 48767 | |||||||| | |||| | | | || ||| | |||||||||||||||||||||||| Sbjct 560 GTCAGCCAGGAACGGTTGGCCGAGGACCTGGGCCTGACCTTCCAGCAGGTCCAGAAATAC 501 Query 48768 GAAAAGGGCGCCAACCGCGTCGGCGCCAGCAGGCT 48802 || || ||||| || ||| ||||||||| ||| Sbjct 500 GAGCGCGGGGCCAATCGGGTCAGCGCCAGCAAGCT 466 >seq107552 Length=9577 Score = 111 bits (122), Expect = 6e-20 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 48648 CCGAACCCAATCGACACGCAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATCATCGGC 48707 || || ||||| || | || ||||| |||| |||| || || |||| || ||||| Sbjct 1600 CCCAATCCAATTGATATCCACGTCGGTAGCCGCGTCCGTCTTCGTCGCATGATGCTCGGC 1541 Query 48708 ATGAGCCAGGAGACGCTGGCTGCGCATCTCGGCATCACCTTCCAGCAGGTCCAGAAATAC 48767 ||||||||||| | ||| | || ||| || || || || |||||||| ||||||| ||| Sbjct 1540 ATGAGCCAGGAAAAGCTCGGTGAGCACCTGGGAATTACATTCCAGCAAATCCAGAAGTAC 1481 Query 48768 GAAAAGGGCGCCAACCGCGTCGGCGCCAGCAGGCTGCAGGCCAT 48811 ||||||||| |||| || | ||||| ||| | || ||||| || Sbjct 1480 GAAAAGGGCACCAATCGTATTGGCGCTAGCCGTCTTCAGGCGAT 1437 >seq32423 Length=346 Score = 107 bits (118), Expect = 7e-19 Identities = 125/167 (75%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 48642 AAGAAGCCGAACCCAATCGACACGCAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATC 48701 ||||||||||| || ||||||| || || ||| |||||| || || || || | || Sbjct 311 AAGAAGCCGAATCCGATCGACATCCATGTTGGCAGCCGCATTCGCCTTCGTCGTACAATG 252 Query 48702 ATCGGCATGAGCCAGGAGACGCTGGCTGCGCAT--CTCGGCATCACCTTCCAGCAGGTCC 48759 | || ||||||||||| | || | ||| | || |||||||| || ||||| | | Sbjct 251 TTGGGAATGAGCCAGGAAAAACTTG--GCGAAAGCCTTGGCATCACATTTCAGCAAATTC 194 Query 48760 AGAAATACGAAAAGGGCGCCAACCGCGTCGGCGCCAGCAGGCTGCAG 48806 |||||||||| |||||| | ||||| |||||||||||| | || ||| Sbjct 193 AGAAATACGAGAAGGGCACGAACCGTGTCGGCGCCAGCCGCCTTCAG 147 >seq104720 Length=876 Score = 95.1 bits (104), Expect = 4e-15 Identities = 138/191 (72%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 44093 GTCGAGGATGGCCTCTTGCTCCATCCGCTCGTCGGTGTCCTGCTTGCGCA-GCGAGATCA 44151 ||| ||||| || |||| ||| |||| | || |||||||||||| | ||| | | Sbjct 820 GTCCAGGATCGCGTCTTCTTCCTGGCGCTTGGCGCGGTCCTGCTTGCGGATGCG-CACGA 762 Query 44152 CCTTCCGCAGGATCTTGGCATCGAAGCCGGTCCCCTTTGCCTCGCCGTACACATCCTTGA 44211 ||||| ||||||||| | ||||||||| | ||||| |||||| |||| || ||||| | Sbjct 761 CCTTCTTGAGGATCTTGACGTCGAAGCCGTTGCCCTTGGCCTCGGCGTAGACTTCCTTCA 702 Query 44212 TGTCGTCGGCGATGGTCT---TCTTTTCTTCCTCCAAGCGTTCGATGCGGTGGATGAAGG 44268 | | | | ||| ||| ||||||| |||| | ||| |||| ||| | ||||| | Sbjct 701 TCTGCT---CCATGATCTCGGTCTTTTCGACCTCAAGGCGCTCGACGCGATCGATGATCG 645 Query 44269 CCTTGAGCTGA 44279 ||| |||||| Sbjct 644 ACTTCAGCTGA 634 >seq109454 Length=55839 Score = 87.8 bits (96), Expect = 7e-13 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 54494 ACTGGGTCATAGCCGGCGGCGAGAGCGGAAAGCTTGCCCGCCCGATGCACCCGGAATGGG 54553 ||||||| || ||||||||| ||||| | | || || ||||||| ||| | |||| Sbjct 47887 ACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGG 47946 Query 54554 TGAGGGGCATCCGCGAAGCCTGCAGCGCGACCGGCGTTCCGTTCCTGTTCAAGCAATGGG 54613 | | | | ||||| ||| || ||||||| |||||||||||||||||||||| Sbjct 47947 CCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGG 48006 Query 54614 GCGAGTGGAAGCC 54626 ||||||||| ||| Sbjct 48007 GCGAGTGGACGCC 48019 >seq90211 Length=353 Score = 86.0 bits (94), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 48669 GTCGGCGCCCGCATCCGGCTCCGCCGCAACATCATCGGCATGAGCCAGGAGACGCTGGCT 48728 || |||||||| | | | |||||||| || || ||| | |||||| | | || Sbjct 350 GTGGGCGCCCGGCTGAGAATTCGCCGCAAGATGATGGGCCTCAGCCAGACCCAGGTCGCC 291 Query 48729 G-CGCATCTCGGCATCACCTTCCAGCAGGTCCAGAAATACGAAAAGGGCGCCAACCGCGT 48787 | ||| || |||||||||||||||||| |||||||||| || |||||||||||| | Sbjct 290 GACGCC-CTGGGCATCACCTTCCAGCAGATCCAGAAATATGAGCGCGGCGCCAACCGCAT 232 Query 48788 CGGCGCCAGCAGGCTG 48803 | ||||||||| |||| Sbjct 231 CAGCGCCAGCAAGCTG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183367141342836