Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq109030 96.9 3e-15 seq107811 93.3 4e-14 >seq109030 Length=5052 Score = 96.9 bits (106), Expect = 3e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 || ||||| || ||||| || |||||| |||||| || |||||| || ||||| Sbjct 2415 AGTTGGTCAACGCCCTGCCCGGCGTAGTCAGCGTCGCAGTCCGTGTACTGTGCGCCAAAG 2474 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || ||||||||||||||||| | ||| || || || || |||||||| | | | ||||| Sbjct 2475 TGCCTCCACTGGAACCCGTATATCGGGCCGAGGTCCCCTTCGCGGCGATGCGC-CAGCCC 2533 Query 21357 T-GCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAAT 21397 | |||| | | |||||||| ||||| | || || ||| || Sbjct 2534 TCGCGCATCGAGGAAGGCGCGAGACCCATTCGGGTTCCAGAT 2575 >seq107811 Length=6275 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062 || || |||| | |||||| || ||||| |||||| || ||||| || |||||| Sbjct 4315 TGCGCCATCATGTGCGTCAGCAGCGCGTACGAGGCGATATTGAACGGCACGCCGAGGAAG 4374 Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122 ||||||||| | ||||||||||||||| || |||| || || ||||| ||||| Sbjct 4375 ATGTCGGCGCTGCGCTGGTACAGCTGGCACGAGAGCTTGCCATCGGCGACGTAGAACTGG 4434 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182 ||| |||| ||||| || || |||| ||| || ||| || |||||| || | Sbjct 4435 AACAGCGCGTGGCAAGGCGGCAGTTTCATCTGCGGGATGTCGGCCACGTTCCATGCCGAG 4494 Query 21183 ATAACGATGCGCCG 21196 | | |||||| || Sbjct 4495 ACGATGATGCGGCG 4508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427196251362480