Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq107681 187 4e-42 seq18333 104 3e-17 seq103458 84.2 3e-11 >seq107681 Length=5071 Score = 187 bits (206), Expect = 4e-42 Identities = 576/879 (66%), Gaps = 13/879 (1%) Strand=Plus/Minus Query 49667 ttttttGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 49726 |||||||||| || || || | |||||| || ||||| ||||| |||| | ||||| Sbjct 4510 TTTTTTGGTAATCTCCTACCCTTTTTTCAAAGAAATTGGTTTTGCCTTGTAGGGATATCA 4451 Query 49727 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 49786 | ||||| ||||||||||| || | | || | ||| | | |||| ||| | Sbjct 4450 TCTCCATAAAATCAAACGGGTTAGATGCGCCGTACACTTTAGGATAACCCAGTTCGCCTA 4391 Query 49787 TCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 49846 | | | || || ||||| || || ||| |||||| || | ||||| ||||| | Sbjct 4390 ACCAACGGTCAGCCACAAACTCAATGTATTGGCTCATCAATTTAGCGTTCATCCCTATTA 4331 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 || || | || | |||| |||||||| |||||| |||||| || || |||| Sbjct 4330 ACGATACCGGCAATGCGTCGGTAATAAATTCTTTTTCAATCTCTACCGCGTCGGTAATAA 4271 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA-ATGTTTAAACATCAAACATGCG 49965 | |||| | |||| ||| || || | | || || | || || || Sbjct 4270 TTTTGGTAACTGCTTCTGTGCTCAGTTTATTCTCCAGCATACCGTAA-AGCAGGCAGGCA 4212 Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025 || |||||||| ||| || || | || |||||||| ||| || | ||||||| Sbjct 4211 AATTCGCAGTGTGAACCTTCATCGCGCGATATCAGTTCGTTACTAAAGGTCAATCCGGGC 4152 Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085 || |||||||| ||||| | ||| || || || || ||| |||||||| || ||| Sbjct 4151 ATCAGGCCACGTTTTTTTAACCAGAAGATAGAACAGAAGCTCCCTGAAAAGAAAATGCCT 4092 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTT 50145 || || || ||||| || || | | ||| || | || || ||| || ||||| Sbjct 4091 TCAACAGCCGCAAATGCTACCAAACGCTCGGCAAAGGTGCCGTTGT--TG-ATCCAGCGC 4035 Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 50205 | ||||| || |||||||||| ||||| || ||||| || | || | || | | Sbjct 4034 AGCGCCCACTCTGCCTTCTTTTGCACACATGGAATCGTATCAACCGCGTGGAACAAACGA 3975 Query 50206 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 50265 | ||||||| ||||||| |||||||| |||| || || | || || || Sbjct 3974 TCTTTTTCAACCGGGTCTTTAATGTAAGTATCTATCAGTAGCGCGTAGGTCTCTGAGTGG 3915 Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG-TAATCTGCACTTC 50324 ||||| || || |||||||| ||||| || || | || |||| |||| ||||| || Sbjct 3914 ATGTTCTCCATCATGATCTGAAAACCGTAAAAGCAACGGGCTTCGGGTAAT-TGCACCTC 3856 Query 50325 TGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 | || ||||| || | ||||| ||||| || || || ||||| |||||||| Sbjct 3855 GCTCATGAA--GTTCACAGCAAGGTTTTCGTTCACAATACCATCGCTGGCGGCAAAAAAA 3798 Query 50383 GCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCC-AATCATTGAT 50441 |||| | || || |||||||| ||| || ||| | |||| ||| || | Sbjct 3797 GCCAGGATGTGCGAAATGAAATGTTTCTCGCCCGG-GTTCATGGCTTCCCAATGTTTCAG 3739 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 || | || | || | |||||| |||||||||| || || | ||||||||||| Sbjct 3738 GTCGTCCGACAGGTCAATTTCTTCGGCTGTCCAAAAGCTGGCTTCCGATTTTTTATACAT 3679 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | ||| || || | |||| || || | || ||||| Sbjct 3678 CTCCCAAATAGCAGGGTATTTTATAGGAAGTATTACAAA 3640 >seq18333 Length=334 Score = 104 bits (114), Expect = 3e-17 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 || ||| || || || || ||| ||| ||| ||| | |||| ||||||||||| || Sbjct 292 TAAACCAATACCGCCGGCGCTTTGAGAAATTTTAGCGGTTTGTTTCAACGTATCATATAT 233 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 || || || || ||||| ||||| | | || |||||| |||||||| | | Sbjct 232 ACCATCAATACTGTCATCCTTCATGGTTAATAAAAAACATGATGACATTTGTGGCTTAGG 173 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || || |||||||| |||||||| | |||||||||||||| || || || | Sbjct 172 GGTGCCTGCATTAAACAAGGTAGGGGTTGCGTGCGTAAACCAACGCTCGCTCATCAGGTG 113 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || | || || ||| |||||| || ||| || || |||| |||||||| || Sbjct 112 GTAGGTTTTGATGGCGCTTTCAATATCCGCTTTATGGATCCCAACCGATACACGCATAAA 53 Query 80454 CATGTGCTGAGG 80465 || ||||| || Sbjct 52 CAAATGCTGCGG 41 >seq103458 Length=5285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT 80322 || || ||||| ||||| |||||||| || |||| | | ||||| || |||| Sbjct 1234 GTGTCGTAGATACCCTCAATGCTATCTTCTTTCATACAGATCAAGAAACAACTGCTCATT 1175 Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 || || | || || || || || | ||| ||||| ||||| || || | |||| Sbjct 1174 TGCGGATGTGGCGTGCCAGCGTTGAACAGGGTCGGAGATGCGTGAGTGAAGTAGCGTTCA 1115 Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCG 80442 |||| |||||||| || || | | || ||| || || | ||||| || |||||| Sbjct 1114 GACATGAGATTGTAGGTTTCCAAAACTCGTTCAATGTCTGAACCGTGAATGCCAACCGCG 1055 Query 80443 ACACGCATTAACATGTGCTGAGGTCTTTC 80471 |||||||| | |||||| ||||| | ||| Sbjct 1054 ACACGCATGATCATGTGTTGAGGGCGTTC 1026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717270397389640