Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq108931 315 3e-81 seq111019 302 2e-77 seq107979 167 1e-36 seq108827 129 3e-25 >seq108931 Length=1129 Score = 315 bits (348), Expect = 3e-81 Identities = 527/748 (70%), Gaps = 28/748 (4%) Strand=Plus/Plus Query 66632 TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAGCCACAGACTG---TGGACGTCATT 66688 |||||| || |||| ||||||||||| || ||| || | |||| ||| | Sbjct 396 TTCGGCAAGGGCTCGGTGATGAAGCTGGGCGAAAAGGGCAAGGTCGAGATGGA-GTCGAT 454 Query 66689 C-CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCC 66746 | |||||||||| ||| || ||| ||| || |||||||| || | ||| |||||| Sbjct 455 CTCCACCGGCTCGCTCGGCCTCGACATCGCCCTTGGCATCGGCGGCCTGCCCAAGGGGC- 513 Query 66747 GGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGG 66806 ||||| | |||||||||||||| ||| || || ||| | || || || || | || Sbjct 514 GGGTGATCGAAATCTACGGCCCCGAAAGCTCGGGCAAGACCACCTTGGCCCTGCATGTGG 573 Query 66807 TGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTG 66865 ||||| ||||| ||||||||||| |||| |||||||| | | ||||| |||||| ||||| Sbjct 574 TGGCCGAATGC-CAGAAGGCCGGCGGCACCGCCGCCTTCGTGGACGCCGAGCACGCCCTG 632 Query 66866 GACCCCGAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 66922 || || | || || ||| ||| ||||| | || |||||||| |||| ||| Sbjct 633 GATCCGGGCTATGCGTTCAA---GCTGGGTGTCAATCTTGACAACCTGCTGGTCTCGCAG 689 Query 66923 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTG 66982 || |||| ||||| ||||||||||||||| || ||| || || ||| || | Sbjct 690 CCCGACAACGGCGAACAGGCCCTGGAGATCACCGATACCCTGGTGCGTTCGGGC--GCCG 747 Query 66983 TC--CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 67040 || ||||||||| | ||||| || || |||||| |||| ||||| ||||||||| Sbjct 748 TCGACATCGTCGTGATCGACTCCGTCGCCGCCCTGACGCCGAAGGCCGAAATCGAAGGCG 807 Query 67041 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 67100 | || || ||||| | |||||||| || ||||| ||| ||||| | ||||||| Sbjct 808 AGATGGGCGACAGCCTGCCGGGCCTGCAAGCCCGCCTGATGAGCCAGGCGCTTCGCAAGC 867 Query 67101 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 67160 | || | | | ||| || ||||||| | ||| |||||||| | || | | Sbjct 868 TGACCGCCTCGATCAACAAGGCCAACACCATCGTCATCTTCATCAACCAGATCCGTCACA 927 Query 67161 AGATCGGCAACGTGGGCTACG---GCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGA 67217 ||||||| ||| |||| ||||| || |||||||||||||| || || ||| Sbjct 928 AGATCGG---GGTGATGTACGGCAGCCCG---GAAACCACCACGGGCGGCAATGCGCTGA 981 Query 67218 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATG 67277 ||||||||| || || || |||| |||| |||| || | | ||||| | || | Sbjct 982 AGTTCTACGCTTCGGTGCGTCTGGACATCCGCCGCACCGGTTCGGTGAAGGTTCGTGACG 1041 Query 67278 AGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACC 67337 || |||||||| | ||| ||||| ||||||||||||||| ||||||||||| || Sbjct 1042 AGATCATCGGCAACAACGTCCGCGTGAAGGTCGTCAAGAACAAGGTGGCCCCGCCGTTCC 1101 Query 67338 GCAACGCCGAGTTCTCCGTCGTGTACGG 67365 || | | ||||||| | || ||||||| Sbjct 1102 GCGAGGTCGAGTTCGACATCATGTACGG 1129 >seq111019 Length=18303 Score = 302 bits (334), Expect = 2e-77 Identities = 549/799 (69%), Gaps = 7/799 (1%) Strand=Plus/Plus Query 66690 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66749 |||||||||| | | |||||| ||| |||||| |||| || ||| | ||||| | Sbjct 15300 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 15359 Query 66750 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66809 | || || ||||||||||| ||||| || || ||| | || ||| || || | | | Sbjct 15360 TCGTCGAGATCTACGGCCCCGAATCCTCCGGCAAGACGACGCTGACGCTGCAGGTCATCG 15419 Query 66810 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66869 || | ||||||| | |||| | ||||| ||||||||| ||||| |||||||| Sbjct 15420 CCGAGATGCAGAAGATCTCCGGCACCTGCGCCTTCATCGACGCCGAGCATGCCCTGGACA 15479 Query 66870 CCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66929 | |||||||| || ||| || ||| |||| | |||| || | ||||| |||| Sbjct 15480 TCCAGTACGCCCAGAAGCTGGGCGTGAACCTGCAAGACCTGCTGATCAGCCAGCCCGACA 15539 Query 66930 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66989 | ||||||||||| || |||||||| ||| || || || ||| || | || Sbjct 15540 CCGGCGAGCAGGCGCTTGAGATCGTCGACGCGCTGGTGCGCTCCGGCTCCGTGGACCTCA 15599 Query 66990 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 67049 ||||| | ||||| || || || ||| ||| |||||||| |||||||||| || || | Sbjct 15600 TCGTCATCGACTCGGTTGCCGCGCTGACGCCCCGCGCCGAAATCGAAGGCGAGATGGGCG 15659 Query 67050 ACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCA 67109 || | | ||||||||| || ||||| ||| |||||| |||||||||| || | || Sbjct 15660 ACCAACTCCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCCCTGCGCAAGCTGACCGCCA 15719 Query 67110 CCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 67169 | ||| | ||||| || ||| |||||||| | ||| |||||||||| Sbjct 15720 CGATCAAGAAGGCCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCG 15779 Query 67170 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCT 67229 | || | |||| || || || ||||| ||||| || || ||| ||||||||||| Sbjct 15780 TCATG---TTCGGCTCGCCCGAAACGACCACCGGCGGCAATGCGCTGAAGTTCTACGCCT 15836 Query 67230 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 67289 | || ||| |||| |||| ||||||| | | ||| | ||||| |||| ||||| Sbjct 15837 CGGTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGAGGAGGTCATCGGCT 15896 Query 67290 ACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 67349 | ||| ||| || ||||||||||||||| | ||||||| | | ||||||| Sbjct 15897 CCGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTCAGCCCGCCGTTCAAGACAGCCGAGT 15956 Query 67350 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGT-G 67408 || | || | ||||| || |||||| || || | ||| || ||||| ||| ||| | Sbjct 15957 TCGACATCCTCTACGGCGAAGGCATCAGCCGCGAAGGCGAGATCGTCGACATGGGCGTCG 16016 Query 67409 TCG-CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTCGC 67467 ||| || || | || | ||| | || ||||||| |||| | | |||| ||| Sbjct 16017 TCGCCAAGG--TCGTCGACAAGGCCGGTGCCTGGTATGCGTACAACGGCGAGAAGATCGG 16074 Query 67468 TCAGGGCAAGCCCAAGGCC 67486 ||||| ||| ||| ||| Sbjct 16075 CCAGGGTAAGGACAACGCC 16093 >seq107979 Length=64576 Score = 167 bits (184), Expect = 1e-36 Identities = 430/650 (66%), Gaps = 19/650 (3%) Strand=Plus/Minus Query 66692 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 66751 || ||||| |||| || || | || ||||| ||||| || | |||||||| || || Sbjct 38191 ACGGGCTCGATCGGGCTCGATGTGGCGCTGGGGATCGGCGGATTGCCGAGGGGGCGTGTT 38132 Query 66752 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66811 || || ||||| || |||||||| || || ||| | || ||| || ||| || ||| Sbjct 38131 GTCGAGATCTATGGGCCAGAATCCTCCGGCAAGACGACGCTGGCGCTGCACTGTGTTGCC 38072 Query 66812 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCC 66871 | |||||||| || ||| || || ||||| ||||||||| | || || || Sbjct 38071 GAAGCGCAGAAAAAGGGCGGCGTTTGCGGCTTTATCGATGCTGAGCACGCGCTCGATCCG 38012 Query 66872 GAGTACGC---CAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGAC 66928 ||||| |||| || ||||| | ||||| | ||| || | |||||||| Sbjct 38011 ATCTACGCGCGCAAG---CTTGGTGTAAATCTCGATGATCTCCTGATTTCGCAGCCGGAT 37955 Query 66929 ACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATC 66988 || ||||| ||||| |||||||| || || || || || ||| | Sbjct 37954 ACCGGCGAACAGGCGTTGGAGATCTGCGATACGCTGGTTCGCTCCGGTTCGCTTGATGTG 37895 Query 66989 GTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGG 67048 | ||| | ||||| || || ||| || ||| || ||||| || ||||| || || Sbjct 37894 CTGGTCATCGACTCGGTCGCTGCCTTGACACCGAAGGCGGAGCTTGAGGGCGAGAT--GG 37837 Query 67049 GACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTG 67106 || | || | | || || || ||||| | ||| ||||| | |||||||| || | Sbjct 37836 GAGATTCGCTGCCGGGTCTTCAGGCGCGTTTGATGAGCCAGGCTCTTCGCAAGCTGACGG 37777 Query 67107 GCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCG 67166 || | || |||| |||| |||||| ||| |||| ||| | | |||| |||| Sbjct 37776 GCTCGATTTCCAAGTCCAAGACGCTGGTTATCTTCATCAATCAGATCAGGCAGAAAATCG 37717 Query 67167 GCAACGTGGGCTACGGCCCGAAT---GAGACCACCACGGGCGGAAAGGCTTTGAGGTTCT 67223 | | || || ||| ||| || || || || ||||| || || ||| ||||| Sbjct 37716 GTGTCATG---TATGGC---AATCCGGAAACGACGACCGGCGGCAATGCGCTGAAGTTCT 37663 Query 67224 ACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTG 67283 | ||||| ||||| ||||| | ||||| |||| | || ||||| || ||| Sbjct 37662 ATGCCTCCGTCCGACTGGATATTCGTCGGATCGGCGCCATCAAGGACAAGGACGAGATGA 37603 Query 67284 TCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCG 67333 |||||| | |||||||| || ||||||||||||||| |||| || ||| Sbjct 37602 CCGGCAATCAGACCCGGGTCAAGGTCGTCAAGAACAAGATGGCACCACCG 37553 >seq108827 Length=1124 Score = 129 bits (142), Expect = 3e-25 Identities = 317/475 (67%), Gaps = 8/475 (2%) Strand=Plus/Minus Query 66692 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 66751 |||||||| | | || ||| ||| || ||| |||| || || | ||||| ||| Sbjct 471 ACCGGCTCGCTGGGGCTCGACATCGCGCTCGGCGTCGGCGGCCTGCCACGCGGCCGTGTG 412 Query 66752 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66811 || |||||||||||||| || || || || || | || ||| || || | | || Sbjct 411 GTCGAAATCTACGGCCCTGAGTCGTCGGGCAAAACCACGCTGACGCTGCAGACCATCGCG 352 Query 66812 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCC 66871 | ||| ||| || |||| | ||||| ||||| || |||||| | || || | Sbjct 351 CAGATGCAAAAGCTGGGCGGCACCTGCGCCTTTATCGATGCCGAGCACGCGCTCGATGTC 292 Query 66872 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 66931 | ||||| | ||||| | | || | | || | | ||||| || || Sbjct 291 GGTTACGCGCAAAAACTCGGCATCAATCTGTCCGAGCTGCTCATTTCGCAGCCCGATACG 232 Query 66932 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCG 66989 ||||||||||| || || || || ||||| || ||| ||| ||| | ||| Sbjct 231 GGCGAGCAGGCGCTCGAAATTACCGATGCGCTCGTGCGCTCGGGC-AGC-GTCGACCTCG 174 Query 66990 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 67049 ||||| | ||||| || || || || ||| ||||||||| |||||||||| || || | Sbjct 173 TCGTCATCGACTCGGTCGCCGCGTTGACGCCACGCGCCGAGATCGAAGGCGATATGGGCG 114 Query 67050 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGG 67107 || || | | ||| |||| || || | ||||||||||| ||||||||||||| || Sbjct 113 AC--TCGCTGCCAGGCTTGCAGGCACGTTTGATGTCGCAGGCGCTGCGCAAGCTCACGGG 56 Query 67108 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 67162 | ||||| | ||||||||||||| ||| |||||||| | ||| |||| Sbjct 55 CTCCATCAACCGCACCAACACGCTCGTCATCTTCATCAACCAGATCCGCATGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242525268614612