Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_004683.1 Length=57050 Score E Sequences producing significant alignments: (Bits) Value seq109371 132 2e-26 seq109454 129 2e-25 seq81106 113 2e-20 seq36499 102 3e-17 >seq109371 Length=32687 Score = 132 bits (146), Expect = 2e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 48604 ACGTCGGGCTGCACTGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGC 48663 ||| ||| | |||||| | |||||||| ||||||||||| ||||| || || ||||||| Sbjct 5645 ACGGCGGCATTCACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGC 5586 Query 48664 ACCCCGACTGGGCCCGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGT 48723 ||||| ||||||||||| || |||||||| ||| |||||||| | ||| |||| | | Sbjct 5585 ACCCCAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACT 5526 Query 48724 TCAAGCAGTGGGG 48736 ||||||||||||| Sbjct 5525 TCAAGCAGTGGGG 5513 >seq109454 Length=55839 Score = 129 bits (142), Expect = 2e-25 Identities = 104/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 48611 GCTGCACTGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGCACCCCGA 48670 |||||||||||||||| ||||||||| ||||| | || |||||||||| ||||| Sbjct 47882 GCTGCACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGC 47941 Query 48671 CTGGGCCCGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGTTCAAGCA 48730 ||||||||| | || |||||||| ||| ||| ||||| |||||||||||||||||||| Sbjct 47942 CTGGGCCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCA 48001 Query 48731 GTGGGG 48736 ||||| Sbjct 48002 ATGGGG 48007 >seq81106 Length=13242 Score = 113 bits (124), Expect = 2e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 48616 ACTGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGCACCCCGACTGGG 48675 ||||||| ||| |||||||||||||| || || || ||||||||||| | |||| Sbjct 8762 ACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCATGGG 8821 Query 48676 CCCGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGG 48735 |||| || |||||||| || ||| |||| ||| ||||||||| ||||||||||||||| Sbjct 8822 CCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAGTGGG 8881 Query 48736 GT 48737 || Sbjct 8882 GT 8883 >seq36499 Length=515 Score = 102 bits (112), Expect = 3e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48618 TGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGCACCCCGACTGGGCC 48677 ||||| ||||||| ||||| ||| ||| || |||||||||||||| || ||||| Sbjct 270 TGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGGGCT 329 Query 48678 CGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGGG 48736 || ||||||||| |||||| |||| ||||| ||||| || || |||||||| ||||| Sbjct 330 CGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAATGGGG 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182197487926344