Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq109454 581 1e-161 seq108184 156 2e-33 seq53202 123 1e-23 seq109371 105 3e-18 seq107328 104 1e-17 >seq109454 Length=55839 Score = 581 bits (644), Expect = 1e-161 Identities = 523/653 (80%), Gaps = 4/653 (1%) Strand=Plus/Minus Query 13540 ATACGGAAGCGTGTGCAGCGGCATCGAGGCCGCGACCGTTGCTTGGCATCCGCTCGGCTG 13599 || ||| ||||||||||||||||||||||| || || || || ||| ||||| || || Sbjct 36893 ATTCGGCAGCGTGTGCAGCGGCATCGAGGCGGCAACTGTGGCCTGGGCGCCGCTGGGTTG 36834 Query 13600 GAAGCCGGCGTGGTTCGCTGAGATCGAGAAATTCCCTAGCGCCGTGCTGGCGCATCATTA 13659 | |||| ||| | || |||||||| ||| | ||||||||||| ||||| || || Sbjct 36833 GCGCGCGGCCTGGCTGGCGGAGATCGACCCGTTCGCCAGCGCCGTGCTCGCGCACCACTA 36774 Query 13660 CCCCGATGTTCCTAACCTTGGAGACATGACGAAGATCACGCGCGCGGTGCTGGCGCGTGA 13719 |||||| || |||| || |||||||| | ||| ||||| |||||| | || Sbjct 36773 CCCCGACACGCCCAACCACGGCGACATGACCACCATCGCGCGCCGTGTGCTGATCGGCGA 36714 Query 13720 GGTCGAAGTGCCTGACGTGCTGGTCGGTGGCACGCCGTGCCAGGCATTCAGCCTCGCGGG 13779 ||| || | || || ||| | ||| |||||||| ||||| || |||||| |||| || Sbjct 36713 GGTGGACGCCCCCGAGGTGTTCACCGGCGGCACGCCCTGCCAAGCCTTCAGCGTCGCCGG 36654 Query 13780 TCTGCGTGAATCCCTCTCGGATGAGCGCGGGAATCTTACTTTGAAATTCGTTGAGTTGAT 13839 ||||| | || || || | |||||| ||||| | | || ||||| ||| | Sbjct 36653 CCTGCGCAAGTCGCTGGACGACGCGCGCGGAAATCTCTCCCTCAAGTTCGTCGAGCTCGC 36594 Query 13840 CGATGCAATTGACCATGTTCGGCGACTCGATGGCGCAGCACCGGC--CGTCGTCGTCTGG 13897 ||||||||||||||||||||| | | || || ||| ||| | ||||||| ||||| Sbjct 36593 CGATGCAATTGACCATGTTCGAGGCCGCGCAGGAA-AGC-CCGCCTGCGTCGTCATCTGG 36536 Query 13898 GAAAACGTCCCCGGCGTCCTCTCGACAAAAGACAATGCGTTCGGGTGCTTTCTGGCTGGG 13957 ||||||||||||||||||||||| || |||||||| || |||||||||||||||||||| Sbjct 36535 GAAAACGTCCCCGGCGTCCTCTCCACGAAAGACAACGCCTTCGGGTGCTTTCTGGCTGGC 36476 Query 13958 CTTGCCGGAGAAGATGAGCCGCTGGTCGCACCAGGGGGCCGGTGGGCGAACGCTGGTTGT 14017 ||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||| | Sbjct 36475 CTTGCCGGAGAAGATGACCCACTGGTCGCGCCAGGGGGCCGATGGGCGAACGCTGGTGCT 36416 Query 14018 GTGTATGGACCCCAGCGTGCAGTCGCTTGGCGGACCCTGGACGCCCAATATTTCGGAGTG 14077 ||| |||||||| ||| ||| |||| |||||||||||||||||||||||||||||| || Sbjct 36415 GTGCTTGGACCCCGGCGCGCAATCGCATGGCGGACCCTGGACGCCCAATATTTCGGACTG 36356 Query 14078 GCCCAACGCCGCCGCCGTGTGTTCGTTGTCGCAAGTGGTCGAGACTGGTTCGATCCCACA 14137 |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 36355 GCCCAACGACGCCGCCGTGTGTTCGTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCGTC 36296 Query 14138 CCGGTACTTTTTGAGTGGGATGGCGTGCGCCGGGATTGTCCGCCGCGCCGAGG 14190 | |||||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 36295 CAGGTACTTTTTGAGTGGGAAGGCGTGCGCCGGGATTCTGCGCCGCGCCGAGG 36243 >seq108184 Length=27730 Score = 156 bits (172), Expect = 2e-33 Identities = 319/469 (68%), Gaps = 10/469 (2%) Strand=Plus/Plus Query 54886 TGGATTTGGACCGACACGCAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTC 54945 ||| | ||||| ||| | ||||| | |||||||| | | | ||| |||||| ||| Sbjct 19053 TGGGTCTGGACTGACCCAGAGCGCACTGACCGGCTAGCCCGCATCTATAACGAGCGTTTC 19112 Query 54946 AACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCTG 55005 ||||| |||||||||||| ||| |||| || |||| || | | ||| | Sbjct 19113 AACAATATCGCGCCGCGCGCCTTCAACGGTGACCATCTGAACTTGGCCCACACATCGG-G 19171 Query 55006 CGCTTCAAC---CTGCGCGAAAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGG- 55061 ||||| || || ||| | ||||||||| | ||||||||| ||| || || Sbjct 19172 CGCTTTCACGCTCTATGCGCA--CCAGAAGCGTGGCATCTGGCGGATCATCACGGCCGGT 19229 Query 55062 -CGACATGTACCTCGCGCACGCGGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGG 55120 |||| | | || ||||| ||||||||||||||||||||| | |||||| |||| Sbjct 19230 TCGACCTAT--CTGGCGCATGCGGTCGGCGCGGGCAAGACGATGACGATGGCTGCGAGCA 19287 Query 55121 GCATGGAGGAGCGCCGGCTGGGCCTCTCCAACAAGCCGATGTACGTGGTGCCGAACCACA 55180 |||||| |||||||||| || || | |||| | ||| ||| ||||| || Sbjct 19288 TCATGGAACAGCGCCGGCTCGGGCTGATCGCCAAGGCAATGCTCGTCGTGCCCGGTCATT 19347 Query 55181 TGCTCGCGCAGTTCGCACGCGAATTCCTCGAGCTCTACCCGGCCGCGAACATCATGGTCG 55240 || || ||| ||| ||||||||||||| |||||| ||| ||| ||| |||| | Sbjct 19348 GTCTGGCACAGGCCGCGCGCGAATTCCTCGCGCTCTATCCGAACGCCCGCATTCTGGTGG 19407 Query 55241 CGGACGAGCAGAATTTCCACACGCACAACCGCCGTCGCTTCGTCGCGCAGGCCGCGCTCA 55300 ||||||| ||| ||| | | |||| || ||||| | |||| || ||| | Sbjct 19408 CGGACGAAACGAACTTCGCGAAGGACAAGCGGAAACGCTTTCTGGCGCGTGCGGCGACCG 19467 Query 55301 ACAATCCGGATGCGGTCATCATCACGCACTCGGCGTTCGGCCGCATCGG 55349 || ||| ||| |||| |||||||| ||||||||| | |||||| Sbjct 19468 CCAGCTGGGACGCGATCATTATCACGCATTCGGCGTTCCGATTCATCGG 19516 Score = 127 bits (140), Expect = 8e-25 Identities = 349/519 (67%), Gaps = 23/519 (4%) Strand=Plus/Plus Query 56408 GCGGCGTGCCCCGCGAGCAGATCGCGTTCATGCGCGACAACAAGGAGCACGCGAAGA-AA 56466 ||||||| ||| | ||||||| ||||||| || ||||| || ||| || | || Sbjct 20569 GCGGCGTTCCCGCCTCAGAGATCGCCTTCATGCAGGATTACAAGAAG-ACG-GACGCCAA 20626 Query 56467 G-AGCGTCTTTTCGCCGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA 56525 | |||| || |||| ||| | |||| ||||| || | ||||||||| || Sbjct 20627 GCAGCGGCTGTTCGGCGATGTCCGCGCCGGCAAGGTTCGGTTCCTGATCGGCTCATCCGA 20686 Query 56526 ---CATGGAAACCGGCGTCAACGTGCAGAAG--CGCCTCTACAGCGAGG-AGCATCTGGA 56579 ||||| ||||||||||| |||| || ||||| | ||| | | ||||| || Sbjct 20687 TACCATGGGCACCGGCGTCAA--TGCACAACTTCGCCTGAAG-GCGCTGCACCATCTCGA 20743 Query 56580 CGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGGCGCATCATCCGCCAGGGCAA 56639 | ||||||||| || | |||||||||||||||| |||||| | || |||||||| Sbjct 20744 TGTGCCGTGGTTGCCCTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGGCAGGGCAA 20803 Query 56640 CCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGACGAAGGGC-AGCTACGACTCGACCA 56698 ||| || | |||| ||| ||| | ||||| ||||| ||| ||| | |||| Sbjct 20804 CCAACACGATGAGGTCGATATCTTCGCCTATGCGACCGAGGGCTCGCT-CGATGCCACCA 20862 Query 56699 TGTGGGGGATGAACGCCCGCAAGGCTCGCTTCATCGAACAGGCCCTCAACGGCGACGACA 56758 ||||| || |||| |||||||| |||||||||| || |||| ||| || || Sbjct 20863 TGTGGCAGAACAACGAGCGCAAGGCCCGCTTCATCGCGGCCGCGCTCAGCGGTGA-TACC 20921 Query 56759 GCG-TGCGCTCGCTGGAGGACGTGTCCGAGGCGTCGGC------GTTCGACATGGCCGCC 56811 || | || | |||| ||| || |||| ||| ||||| ||||||| Sbjct 20922 TCGATCCGGCGGTTGGAAGACCTGGGTGAGGGCCAGGCGAACCAGTTCGCCATGGCCAAA 20981 Query 56812 GCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCCGGCCTGAAGGCCGACGTCGAG 56871 ||| | || ||||| || |||| | ||| || || || || ||||||| ||| Sbjct 20982 GCGATAGCCTCGGGTGATCAGCGATTGATGCAGAAAGCTGGGCTCGAGGCCGATATCGCC 21041 Query 56872 CGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAG 56910 ||||| || ||||| || ||| || || ||||||||| Sbjct 21042 CGGCTCGAACGCCTCCGCGCCGCCCATCAGGACGACCAG 21080 Score = 89.7 bits (98), Expect = 2e-13 Identities = 164/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 55513 AAGGACAAGGTGCTGTCGTTCGAGGAGCTGGGCGTCGACCGTCTGTTCGTCGACGAATTC 55572 |||||| | | || || || |||| | ||| |||||| | ||||||||||| Sbjct 19674 AAGGACGATCTACTCACGATCTCGGAGATCGGCATCGACCAGATCATCGTCGACGAAGCG 19733 Query 55573 CACGAGTTCCGCAAACTCGACTTCGCGACGCAGCAGAGCAACA-TCAAGGGCATCGACCC 55631 || |||||||| ||||| |||||| || || || | || | ||||| |||| || Sbjct 19734 CAGGAGTTCCGTAAACTTAGCTTCGCCAC-CAACATGTCGACGCTGAAGGGTGTCGATCC 19792 Query 55632 GGCCGGCTCGCAGCGCGCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAA 55691 |||||||||||||| |||||| | ||||| || | | | | ||||| Sbjct 19793 CAATGGCTCGCAGCGCGCCTGGGACCTCTATGTGAAGTCCCGGTTCATCGAGACGAAGAA 19852 Query 55692 GCCGGGCCGCGCGCTCGTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAG 55749 || ||||||||||| ||| ||| ||||| || || |||| |||||| | |||||| Sbjct 19853 CCCCGGCCGCGCGCTTGTGCTCGCTTCCGGAACACCCATCACCAACACGCTTGGCGAG 19910 >seq53202 Length=9363 Score = 123 bits (136), Expect = 1e-23 Identities = 234/342 (68%), Gaps = 23/342 (7%) Strand=Plus/Plus Query 10136 AATA-ATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAG 10194 |||| |||||| || || || || || | || || ||| | ||| |||||| ||| Sbjct 1810 AATACATGGCATCAGTGAATAAAGTCATCATCGTCGGCAACCTGGGGCGCGATCCGGAAA 1869 Query 10195 TCCGTTACCTGCCGAGCGGCGACGCGGTTGCGAACAT--CCGTCTCGCGACGACCGATCG 10252 |||| ||| |||| ||||||||||| | || ||||| |||| || || | || Sbjct 1870 TCCGCTACATGCCCAGCGGCGACGCCATCGCCAACATTGCCGTG--GCCACCTCGTTCCG 1927 Query 10253 ATACAAGGACAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTT 10312 | || |||||| | |||||| ||||| | || |||||||||||| ||||||| Sbjct 1928 TTCGAAAGACAAGAACACCGGCGAGCAGAAGGAAACCACCGAATGGCACCGCATCTCGTT 1987 Query 10313 CTTCGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACAT 10372 |||||| || ||||| |||||||| | | || ||||| || || | || |||||| | Sbjct 1988 CTTCGGCCGTCTGGCCGAGATCGTTGGCCAGTACCTGAAAAAAGGTTCGTCGGTCTACGT 2047 Query 10373 CGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGAT--CGT------ 10424 || || || | ||||||| |||| | ||| | ||||| ||| Sbjct 2048 TGAAGGCCGTCTGCAGACGCGCAAGT---------ATACCGACAAGGATGGCGTCGAGAA 2098 Query 10425 -TACACGACCGAGATCGTCGCTGACCGCATGCAGATGCTCGG 10465 ||| ||||||| || ||||| || ||||||||||||||| Sbjct 2099 GTACGCGACCGACATTGTCGCCGAGAACATGCAGATGCTCGG 2140 >seq109371 Length=32687 Score = 105 bits (116), Expect = 3e-18 Identities = 238/348 (68%), Gaps = 21/348 (6%) Strand=Plus/Plus Query 15809 CGGCAACCCCGGCACCGGCAAAAGCCATCTCGCGCTCGCGATCCAGCAGTACGTGATGCG 15868 |||||| |||||||||||||| | ||||||||| |||| || | || | || || Sbjct 26484 CGGCAAGCCCGGCACCGGCAAGACCCATCTCGC---CGCGG--CA-CTGTGCCTGGCGCT 26537 Query 15869 GC---ACTCGA-CGGC------CATGTACCTCGAcgcgatggcgctgatccgccgcgtgc 15918 || ||||| || | || |||| || | ||||||||||||||| |||| Sbjct 26538 GCTGGACTCGGGCGTCTGGGTGCA-GTACGTCACCTGCATGGCGCTGATCCGCATGGTGC 26596 Query 15919 gcgcgacgtggcgccgcgatgcgccgcAGAGCGAGGAGGAAGTGCTGCACACGCTCGGCT 15978 ||| || ||| |||| ||||| || || ||| | || || || ||| ||| Sbjct 26597 GCGACACCTGGGGCCGGGATGCCGAGCGGACGGAGCGGTCGGTCGTGAACCTGCTGGGC- 26655 Query 15979 TCA-CGG-TCGACCTGCTGGCGATCGACGAGATCGGCGTGCAGCGCGGCACCGACGACGA 16036 || ||| |||||||||||| |||||| ||| | ||||||||| ||||||||| || Sbjct 26656 -CAGCGGATCGACCTGCTGGTGATCGATGAGGTGGGCGTGCAGTACGGCACCGAGTCGGA 26714 Query 16037 GCAGGCGATCGTGTTCGAGATCATCAACCGCCGCTACCGCGACTTGCGGCCGACGATCCT 16096 |||| ||| |||||||| | | || || ||| ||| ||||||| ||| | || Sbjct 26715 GCAGCACATCCTGTTCGAGGTGCTGGACAAGCGGTACGCCGAGATGCGGCCCACGCTGCT 26774 Query 16097 GATGACGAACCTGAACGGCGCGGGCCTGAAGGACTTCCTCGGCGCGCG 16144 ||| || |||| | || | ||||| | | | || |||||| ||| Sbjct 26775 GATCACCAACCAGGACAGGACGGGCTTTATCAAGGTCATCGGCGAGCG 26822 >seq107328 Length=16160 Score = 104 bits (114), Expect = 1e-17 Identities = 225/331 (68%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 10140 ATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGT 10199 ||||| ||||| ||||| || || | | || ||| | || ||| || || |||||| Sbjct 16081 ATGGCCAGCGTCAACAAAGTCATCCTCATCGGCAACCTCGGCCGCGACCCCGAGGTCCGT 16022 Query 10200 TACCTGCCGAGCGGCGACGCGGTTGCGAAC-ATCCGTCTCGCGACGACCGATCGATACAA 10258 ||| || ||||||| ||| | | | || ||| | || || || ||| || || Sbjct 16021 TACAACCCCAGCGGCGGCGCC-TGGTGCACGATCAGCCTGGCCACCACC---CGCAACTG 15966 Query 10259 GGACAAG-GCGAG--CGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTT 10315 | | || ||||| |||||| | |||| | ||| |||||||||||||| ||| Sbjct 15965 GAAGAACCGCGAGACCGGCGAACGCCAGGAAGAGACCGAATGGCACCGCGTGGTTTTCAA 15906 Query 10316 CGGTCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGA 10375 || || ||||||| || | | ||| ||||| |||||| | |||||| |||| Sbjct 15905 CGACCGTTTGGCTGAAATTGCTGGCGAATACCTGAAGAAGGGCCGCCCCGTCTACGTCGA 15846 Query 10376 GGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGA 10435 || ||| | ||||| || ||||||||||| | ||| |||| ||||| ||||| Sbjct 15845 AGGCCGCCTGAAGACCCGCAAGTGGCAGGACAAGGAAGGCAAGGACACCTACACCACCGA 15786 Query 10436 GATCGTCGCTGACCGCATGCAGATGCTCGGC 10466 |||| | || |||| ||||| |||| ||| Sbjct 15785 GATCATTGCCGACCAGATGCAACTGCTGGGC 15755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204020723187723