Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq18243 95.1 2e-15 >seq18243 Length=2233 Score = 95.1 bits (104), Expect = 2e-15 Identities = 288/443 (65%), Gaps = 4/443 (1%) Strand=Plus/Minus Query 294 CTCGTTGCGCACAAATACCTTTGCCACCTTCTCAACGTCACCGAGTGAGCCGATATTCTC 353 |||||||||| | || || | |||| || || ||||||| |||| || | Sbjct 508 CTCGTTGCGCTCGAACACGGCCGAGGCCTTATCGACATCACCGAAGCCGCCGGCGTTGGC 449 Query 354 GGGCTTGCCGCCCATAAGCTGGAACGGCACGCGGTGAGCGTCCATCAGGTCGGCGGCACT 413 |||| | ||||| |||||| |||||| || || ||| ||| | |||| || Sbjct 448 GGGCACGATGCCCAGCAGCTGGGGCGGCACCCGATGCGCGGCCAGGACGTCGTCGCGCGA 389 Query 414 GGCTTTCTTGATATTGAAAAAGTCATCCTTTGTGGCGACCTCGCTCAGTGGCACGATTTT 473 || |||||||| || ||| || ||||| | ||||| |||||| | || | ||| | Sbjct 388 GGTGTTCTTGATCCCGACAAACTCGTCCTTGGCGGCGATCTCGCTGATCGGAATGATCTG 329 Query 474 TATGCCGTCCGGTTTCCCGTTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCC 533 ||||| | | | |||| ||||||| || || ||||| ||||| || |||| Sbjct 328 GATGCCCTTCTCATGCCCGCCTGGTGAGTGGATGAAGAGGTTCCGGAAGTTCCCCGGCCC 269 Query 534 TTTAGAATTACGCATTGCATCGCGCAGC--GATTCGACGTCAGTCGCGCTTTGCGCCGGG 591 || | ||||| | |||| | | ||||| || | ||| | || Sbjct 268 CTTGCCCTCGCGCAT--CTTCGCCTTGATGGCATCGACCTCTTCCTGGCTCATGTTCTGG 211 Query 592 TCAGTCACATACATGATGTAACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAAC 651 || || || ||| | || |||||| |||||| |||| ||||||||||||||| Sbjct 210 TCGGTGCTGCGCAGGATAAAGCCGACGTGCGAGCCGTTGAGGTAGTACTTGCGGCGGAAC 151 Query 652 AGCGTCGCGGATTCATTCAGCCACGCAGAATTAAGCGCGCTGAGATATTCAGGCAGGCCG 711 || ||||||| || || || |||| || | || |||| || ||||| || |||||| Sbjct 150 AGGGTCGCGGCCTCGTTGAGGAACGCTGACTGCAGGGCGCCAAGGTATTCGGGTAGGCCG 91 Query 712 TAAATCTCCTGATTAATATCAGG 734 || | | ||| || || || || Sbjct 90 TAGACGTTCTGGTTGATGTCCGG 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97784303928476