Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq83492 138 7e-28 seq109454 134 8e-27 >seq83492 Length=1330 Score = 138 bits (152), Expect = 7e-28 Identities = 236/338 (70%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 72250 TGAGCATGATTATGATCGACTACCTGCAACTTATG-CGCGTCCCCGAGCTGCAAGATAAC 72308 || || |||| || |||||||| |||| || ||| || || || ||| | |||||| Sbjct 129 TGGGCCTGATCATCATCGACTATTTGCAGCTGATGACGGGTAGCC-AGCCGGGCGATAAC 187 Query 72309 CGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAA 72368 || || || || |||||||||| || || |||| |||| |||||||| || Sbjct 188 CGCACCGCCGAGATCTCCGAGATTTCGCGTAGCCTTAAGGGCCTGGCCAAGGAATTGCAT 247 Query 72369 GTACCGGTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGA 72428 |||||| | || |||| || || || || |||| || || || || |||| || Sbjct 248 TGCCCGGTGATCGCGCTGTCGCAGCTGAACCGCGCGCTCGAGCAACGGCCGAACAAGCGT 307 Query 72429 CCGGTAAATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATG 72488 || || | || || || || ||||| || ||||| ||||||||||| ||| | || || Sbjct 308 CCCGTGATGTCCGACTTGCGCGAATCGGGCGCAATCGAGCAGGACGCCGACGTCATCATT 367 Query 72489 TTTCTGTATCGCGACGAAGTTTATCACCCGGAT--AGCGAAATGAAGGGCATTGCCGAGG 72546 || ||||| |||||||| || || |||| ||| | | | ||||||| |||||| Sbjct 368 TTCCTGTACCGCGACGAGGTCTACAACCCCGATTCACCCGA--CAAGGGCACCGCCGAGA 425 Query 72547 TAATTATCGGAAAGCAACGAAATGGCCCAATTGGCACG 72584 | || ||||| || || || || ||||| || ||| || Sbjct 426 TTATCATCGGCAAACAGCGTAACGGCCCGATCGGCGCG 463 >seq109454 Length=55839 Score = 134 bits (148), Expect = 8e-27 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 66991 GCCTGGAGAATCCTTGATGCCCAATACTTCGGAGTGGCACAACGACGCCGACGCGTGTTT 67050 || ||| | | ||| || |||||||| |||||| |||| ||||||||||| || ||||| Sbjct 36391 GCATGGCGGACCCTGGACGCCCAATATTTCGGACTGGCCCAACGACGCCGCCGTGTGTTC 36332 Query 67051 GTTGTCGCAAGTGCTCGAACAGACCTCGATCCCGCAACGGTACTTTTTGAGTTCGAAGGC 67110 |||||||||||||||||| | ||||||||| |||||||||||||| |||||| Sbjct 36331 GTTGTCGCAAGTGCTCGAGACGGGTTCGATCCCGTCCAGGTACTTTTTGAGTGGGAAGGC 36272 Query 67111 GTGCGCCGGAATATTGCGCCGAGGCGA 67137 ||||||||| || ||||||| | ||| Sbjct 36271 GTGCGCCGGGATTCTGCGCCGCGCCGA 36245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 302824236799521