Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_005886.2 Length=47399 Score E Sequences producing significant alignments: (Bits) Value seq27727 93.3 1e-14 >seq27727 Length=508 Score = 93.3 bits (102), Expect = 1e-14 Identities = 235/355 (66%), Gaps = 2/355 (1%) Strand=Plus/Minus Query 23917 TCGATCCATTCGAGCGGGATAAGCACACCCTCAGCGGATGCGCTGTAGTCGATGTCGATT 23976 |||| ||||||| ||||| || || ||||| | |||||| |||| || ||||| Sbjct 508 TCGACCCATTCGCCGGGGATGAGGACGCCCTCGACCGATGCGGCATAGTTAATATCGATC 449 Query 23977 TCCTGTGCGACGACGAGCGCATTGAATTTCTGTTTCTGCTTCTTATACCACTCGTCATCT 24036 || || |||||| || || || | || | ||||| | |||||| | | |||| Sbjct 448 TCTTGCGCGACGGTGACCGGATCTAGTTCATCGCATTGCTTGTCATACCATTTCTGATCT 389 Query 24037 TTGCGCGGATCGTCGCG-CCAATGCATCGTTTTCACCTTAACGCGACCGGAGAAACGTTT 24095 ||||| || || | ||| |||||| || |||| | ||| || || || Sbjct 388 TTGCGGGGGTCTT-GCGTCCAATGGCAAGTAAATACCTCGATCTTGCCGCCAAAGCGCTT 330 Query 24096 CTCAGCAAACGGATTGTTAAGCCCATTGACGGACGAAATATCGATACGACAGTTCGTCGT 24155 || || || || ||| || || ||| || || ||||||||||| || || ||||| Sbjct 329 TTCGGCGAAAGGGTTGGCGAGGCCGTTGGCGCTGGAGATATCGATACGGCAATTAGTCGT 270 Query 24156 TGCCGCAAGCGCCGTATCTACCGCTTGCGCGTTCTCCAAGTGTGCCGCTTCGTCGACGAA 24215 | || |||| || || | |||| ||||| | ||||| ||||| ||||| Sbjct 269 TTGCGATAGCGACGCCTCGATAAGCTGCGGTCGCTCCAGATAGGCCGCCTCGTCAACGAA 210 Query 24216 CTGGATCGAGACCCGGCCACCACGCCCGATGTTCTTCCCGGCTTCGCCACGAATC 24270 | ||||| | || | || ||||||||||| | |||||||||||| |||| Sbjct 209 ATAGATCGTCGCACGATCGCCGCGCCCGATGTTGTCGCCGGCTTCGCCAGTAATC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151355069558682