Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq111127 80.6 4e-11 >seq111127 Length=9404 Score = 80.6 bits (88), Expect = 4e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||| || || || || ||||| || || |||||| |||| Sbjct 2779 AGGCATCACCAAGCCCGCTATCCGCCGGCTCGCCCGCCGTGGCGGTGTGAAGCGTATCTC 2838 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | |||| || |||| |||| || | |||||||||||| | | ||| Sbjct 2839 AGGGCTCATCTACGAGGAGACGCGTGGCGTGCTCAAGATCTTCCTCGAAAACGT 2892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78973528147293