Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq107653 163 4e-35 seq104315 96.9 4e-15 seq75994 84.2 3e-11 >seq107653 Length=176415 Score = 163 bits (180), Expect = 4e-35 Identities = 274/394 (70%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 80154 TGAGATGTCATTCAGCATCGAGAAGACCTCGGTAACCGCTCAGTCAAGAGCACTCAAGGC 80213 ||||||| | ||||||||||||||| | | || || || || | || || || Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGC 133087 Query 80214 TGAGTACACCCTAGAACTCGCACAAGACCTCAAGGCAATTCATGGTCTTGATGCTGAGCA 80273 |||||| | | ||||| ||||| ||||| |||||| | || ||||| || || ||| Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 80274 AGAGCTTGCTAACATTCTTTCGAGTGAAGTTCTTGCTGAGATCAACCGCGAAGTTGTACG 80333 ||||| | ||||| || | | || | || || |||||||||||||| | || || Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 80334 TAGAGTGTACACAGTTGCCAAGAAAGGTGCTCAGAACAACGTTGCTAACGCTGGCATCTT 80393 || || || |||||| | || | |||| | || | ||| | ||| |||| Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 80394 CGACCTTGATGTTGATTCAAATGGTCGTTGGTCTGTTGAAAAGTTCAAGGGTCTTCTATT 80453 |||||| || || || || || || || ||||| ||||| |||||||||||||| || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 80454 CCAAGTTGAGCGTGA-TGCTAACGCAATCGCACAAGAGACTCGTAGAGGCAAGGGTAACT 80512 ||| | ||||| || ||| ||| ||||| | ||||| | | |||||||||||| Sbjct 132846 CCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACA 132788 Query 80513 TCCTAATCTGCTCTGCTGACGTTGCTTCAGCACT 80546 |||| |||||| | || ||||| || || || || Sbjct 132787 TCCTGATCTGCACGGCGGACGTGGCATCGGCTCT 132754 >seq104315 Length=764 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 165220 GCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAA--TTCGTG 165277 ||||| ||||||||||||||||||||||||| || |||| ||||||| || ||||| Sbjct 86 GCCCAGGTGGCGGAATTGGTAGACGCGCTGGCTTCAGGTGCCAGTGACCGAAAGGTCGTG 27 Query 165278 GAGGTTCAAGTCCTCTCTTGGGCAC 165302 ||||||| ||||||||| ||||||| Sbjct 26 GAGGTTCGAGTCCTCTCCTGGGCAC 2 >seq75994 Length=328 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 119469 GTCGCCAAGTGGTAAGGCAGCGGGTTTTGGTCCCGCCATTCGTGGGTTCGAATCCT 119524 ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct 208 GTCGCCAAGTGGTAAGGCAGCGGTTTTTGGTACCGCCATTCGGAGGTTCGAATCCT 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627095116630400