Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq38326 179 6e-40 seq17713 176 7e-39 seq89901 154 2e-32 seq107653 140 5e-28 >seq38326 Length=18890 Score = 179 bits (198), Expect = 6e-40 Identities = 511/775 (66%), Gaps = 43/775 (6%) Strand=Plus/Plus Query 193431 AAAAAAG---CATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTT 193487 ||||||| |||| ||||||| ||||| |||||||| ||||||||| | || || || Sbjct 9142 AAAAAAGTTGCATTGGTAACAGGGATAACCGGGCAGGACGGATCTTATTTAGCGGAACTT 9201 Query 193488 CTTTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAG---AAGTTCCCT-AAT-CA 193542 | || || || |||||||| || || || ||| | | ||| | ||| || Sbjct 9202 TTACTGGAAAAAGGTTATGAAGTGCACGGCGTTAAAAGACGGGCATCTTCTTTTAATACA 9261 Query 193543 ATACTCATAGAA---TTG-ATCAT-ATCT--ATGAGA---AGATCACT------CTTCAT 193586 | | |||||| ||| |||| | || ||||| | || | | |||||| Sbjct 9262 AAGCGCATAGACCATTTGTATCAAGACCTTCATGAGGGACATATTAATTTTAAACTTCAT 9321 Query 193587 TATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACCTGCT 193646 || |||||||| |||||| || | ||| |||| | |||| || |||| | || | | Sbjct 9322 TACGGAGATCTGACTGATTCTATGAATATTATAAGAATCATACAGGAAGTTCAGCCCGAT 9381 Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 ||||| || || || || ||| ||||| || ||||| || || || ||| || ||| Sbjct 9382 GAGATATACAACCTAGGCGCTATGAGTCACGTAAAAGTATCTTTCGATTCGCCTGAATAT 9441 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 | ||||| || | | | || || | | ||| | ||||| || | || ||||| Sbjct 9442 GTAGCCAATGTGGACGGTATTGGGACATTGCGGATATTGGAAGCTGTAAGGATACTGGGA 9501 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTC-- 193824 | || || | | || || |||||||||||| |||||| ||||| || || Sbjct 9502 CTTGAAAAGAAAACAAGGATATACCAGGCATCTACCTCCGAACTATATGGCGGCCTTGCC 9561 Query 193825 -----TAGGCACTCCAC-------TATCA-GAAACCACACCATTTCATCCACGCTCTCCT 193871 || | || | ||| | |||| | |||||| | || || || ||| Sbjct 9562 GAAAATAAGAACGAGAAAGGTTTTTATGATGAAAATTCGCCATTTTACCCGCGTTCACCT 9621 Query 193872 TATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGA 193931 || || ||||| || | || |||| |||||| | |||||| ||||| || | ||| Sbjct 9622 TACGGAGTAGCTAAAATATACGGTTTTTGGATAACCAAGAACTATCGCGAAGCTTATAAC 9681 Query 193932 TTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTT 193991 | |||| || |||| || | || || ||||| || |||||||||||||| || || Sbjct 9682 ATGTACGCGTGTAATGGTGTTTTATTTAACCACGAGTCGCCAAGAAGAGGTGAAACCTTC 9741 Query 193992 GTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATT--C 194049 || || |||||||| || | | || || | | || | | |||||| | Sbjct 9742 GTGACCCGTAAGAT--AACGATGGCTACAGCAGCTATAGCTTTGGGGAAGCAAGATTGCC 9799 Query 194050 TTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAG 194109 ||| || ||||| |||||||| | | ||||||||||| ||||| || ||||| || | Sbjct 9800 TTTTCCTCGGTAACCTTAATGCGCAACGTGATTGGGGACATGCAAAAGACTATGTGGAGG 9859 Query 194110 CGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164 |||||||| || |||||||| || ||||||| || ||||| | || ||||| Sbjct 9860 CGATGTGGCGCATATTGCAACAAGACAAACCCGAAGACTATGTACTGGCCACAGG 9914 >seq17713 Length=4866 Score = 176 bits (194), Expect = 7e-39 Identities = 406/609 (67%), Gaps = 31/609 (5%) Strand=Plus/Plus Query 193428 ATGAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTT 193487 ||||| |||||| |||||||||| ||||| || ||||| ||| |||| || |||| ||| Sbjct 4204 ATGAAGAAAGCAATAATAACAGGTATAACAGGACAGGACGGAGCTTACCTAACCGAATTT 4263 Query 193488 CTTTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCCCTAATCAATACT 193547 | ||| ||||||||||||||| ||||| ||| |||||||||||| || | ||||| Sbjct 4264 TTATTGAATAAGGGATATGAAGTCCATGGCATTAAAAGGAGAAGTTCTTTATTTAATACA 4323 Query 193548 CATAGAATTGATCATATCTATGA----------GAA--------GA---TCACTCTTCAT 193586 | | ||||| ||| | ||| | ||| || | || |||||| Sbjct 4324 GACCGGATTGACCATTTATATCAAGATCCACATGAATCACAAGTGAGATTAACCCTTCAT 4383 Query 193587 TATGGAGATCTAACTGATCCTGTAAATGTTATGGG---TGT-CATTAGGGCAGTTGAACC 193642 || || ||| || ||||| | |||| | || | ||| || | ||| | || Sbjct 4384 TACGGTGATTTATCTGATTCAACAAATTTAATACGCATTGTCCAACA----AGTACAGCC 4439 Query 193643 TGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGA 193702 | |||||| ||||||||||| || ||| |||||||| ||||| | || || Sbjct 4440 AGATGAGATTTATAATCTTGGCGCGATGTCTCACGTTAAAGTGAGTTTTGATACACCCGA 4499 Query 193703 GTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTT 193762 |||||| | |||| |||| | ||||||| | | || | || || | || || || Sbjct 4500 GTATACCGCAAATGCCGATGGTATAGGAACATTACGCTTATTGGAGGCTTTGCGCATATT 4559 Query 193763 GGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 ||| | |||||| | | || ||||| ||||| || || | |||||| || Sbjct 4560 AGGATTAGAGAAAAAAACTAAGATATATCAAGCATCCACTTCAGAGTTATATGGT-TTGG 4618 Query 193823 TCTAGGCACT-CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAG 193881 | | ||| | || | ||| ||||| || || ||| |||| || || ||||||| |||| Sbjct 4619 TGCAAGCAGTGCCGCAATCTGAAACTACCCCCTTTTATCCGCGTTCGCCTTATGCGGTAG 4678 Query 193882 CAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTA 193941 | || |||||| ||||||||| | ||| |||||||| | || || | ||| Sbjct 4679 CTAAAATGTATGCTTATTGGATTACTGTGAACTATCGTGAAGCTTACGGCATATTTGCTT 4738 Query 193942 GTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTA 194001 || ||| || | || || |||||| || | | ||||| |||||||| || || | Sbjct 4739 GTAATGGAATATTGTTTAACCACGAAAGCCCTCTACGCGGTGAAACATTTGTTACGCGAA 4798 Query 194002 AGATTACAC 194010 | || |||| Sbjct 4799 AAATAACAC 4807 >seq89901 Length=44846 Score = 154 bits (170), Expect = 2e-32 Identities = 350/524 (67%), Gaps = 2/524 (0%) Strand=Plus/Plus Query 193646 TGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTA 193705 ||||||||||||||| | || ||||| ||||| | || || ||||| | ||| || || Sbjct 23646 TGAGATCTATAATCTGGCCGCGCAAAGCCATGTCCACGTCTCGTTTGAAACGCCGGAATA 23705 Query 193706 TACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGG 193765 || | || |||||| | || || | || | || ||||| |||| || |||| Sbjct 23706 CACGGCGAACTCCGATGCTCTTGGGACCATGAGGCTGCTGGAAGCTATTCGCATTCTGGG 23765 Query 193766 AATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCT 193825 | ||||| | ||| ||||||||||||| ||| || |||| ||| || || Sbjct 23766 GCTCGAGAAGAAAACCCGCTTCTATCAGGCATCGACCTCAGAGTTGTACGGT-CTGGTCC 23824 Query 193826 AGGCACT-CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAA 193884 ||| | |||| || ||||| || || || |||||||| ||| |||| || |||| Sbjct 23825 AGGAGGTCCCACAGTCCGAAACAACGCCGTTCTATCCACGCAGTCCCTATGCCGTCGCAA 23884 Query 193885 AGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTT 193944 || | || | || ||||||| || ||||| || | |||||| | ||||| Sbjct 23885 AGCTCTACGCCTACTGGATCACGGTCAACTATCGCGAAGCCTATGGAATTCACGCGTCAA 23944 Query 193945 CTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGA 194004 || ||| | ||||||||||| || | ||||| ||||||||||| || |||| Sbjct 23945 ACGGAATTTTGTTCAATCACGAGAGCCCTTTGCGCGGTGAAACATTTGTAACGCGCAAGA 24004 Query 194005 TTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATC 194064 |||| || | | || |||| ||| ||| || ||||| ||||| | Sbjct 24005 TTACCAGAGCCGTGGCAGCCATTAAACTTGGCCGTCAGGAGAAACTATATCTGGGTAACC 24064 Query 194065 TTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGT 194124 | |||| ||| |||||||||| ||||| || || || || | ||||||| | ||| Sbjct 24065 TGGATGCCAAGCGGGATTGGGGCCACGCGAAAGAATACGTGCGCGGGATGTGGCTCATGC 24124 Query 194125 TGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | |||||||| || || ||||| || | || || |||||| Sbjct 24125 TACAACAGGACCAAGGTGACGATTACGTTCTGGCGACTGGTGAA 24168 >seq107653 Length=176415 Score = 140 bits (154), Expect = 5e-28 Identities = 469/714 (66%), Gaps = 32/714 (4%) Strand=Plus/Minus Query 119848 AGATGGCATTCAGCATCGAGAAAGTAACAGTTACTGCGAAATCTCGTGCGTTGAAAGCTG 119907 ||||||| |||||||||||||| || || || || ||||| || ||| || || | Sbjct 133144 AGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCCG 133085 Query 119908 AGTACTCACTAGAGCTTGCTCAAGACCTCAAGGCAATCCACGGTTTGAATGCAGAAGCAG 119967 ||||||| | || || || || ||||| |||||| | |||||| | | || || || | Sbjct 133084 AGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCTG 133025 Query 119968 AACTTGCTAACATTCTTTCTACTGAGATCCTTGCGGAAATCAACAGAGAAGTTATCAGAA 120027 | || | ||||| || | || |||||||| || || |||||| | || | | | | Sbjct 133024 AGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGTA 132965 Query 120028 CTATCTACAACGTAGCAGAGCCTGGTGCTCA-AGC-AAACGTTGCTGCTGCTGGAACATT 120085 | || | | || ||| || | || | | | ||| | | || || Sbjct 132964 CGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACG--ACCAACCCGGGCTTCTT 132907 Query 120086 CGACCTTGACACCGATTCAAACGGTAGATGGTCAGTTGAGAAGTTCAAAGGACT-TATCT 120144 |||||| ||| ||| || ||||| | ||||| |||||||||||||| || || ||| | Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTAT-T 132848 Query 120145 TCCAGATCGAGCGTGATGCCAACGCTATCGCACAAAGA-ACTCGTCGTGGAAAGGGTAAC 120203 |||| |||||||| || |||| ||||| ||| || || | ||||| ||||||||| Sbjct 132847 TCCACATCGAGCGCGAGTGCAACCAGATCGC-CAAGGAGACGAGGCGTGGCAAGGGTAAC 132789 Query 120204 ATGATCCTTTGTTCCGCAGACGTTGCTTCTGCTCT-AACAATGGCTGGT-GTTCTCGATT 120261 || | | || | || ||||| || || ||||| ||| | | | | |||| || Sbjct 132788 ATCCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGGCTACCTCTCCATG 132729 Query 120262 ACACTCCTGCACTTAACGCTAACCTTAATGTAGATGATACAGGCAATACATTTGCTGGTA 120321 | |||| | || ||||| | || || || || ||||| || || || |||| Sbjct 132728 CCGAACCTG--GGTGAC---AACCTCCAGGTCGACGACACGGGCAACACCTTCGCGGGTA 132674 Query 120322 TTCTTCAAGGTAAGTATC-GTGTATACATCGATCCTTTCTCTGCTTCTGGTGGAGCCGCT 120380 | || | ||| | ||| || |||||||| || | | | || | || Sbjct 132673 TCCTGAACGGT-CGCATCAAGGTCTACATCGACCCCTACGC-----------GATCGGCG 132626 Query 120381 GCTACTCAGTACTACGTAGTTGGTTATAAGGGTTCATCTCCTTATGACGCTGGATTATTC 120440 | ||| | | |||| || || |||||| | | ||||| ||||| || | ||| Sbjct 132625 GAAACT-ACATGTGCGTA---GGCTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTC 132570 Query 120441 TACTGCCCATACGTTCCTCTACAGATGGTTCGTGCGGTTGGTCAGGATACATTCCAACCT 120500 |||||||| ||||||||||| ||| ||||||||| || | | || || ||| ||| Sbjct 132569 TACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCT 132510 Query 120501 AAGATTGGCTTTAAGACAAGATACGGTCTTGTTGAGAACCCATTCTCTCAAGGA 120554 || ||||| ||||| | ||||| | || | |||||| ||| | || ||| Sbjct 132509 CGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGCACAGGGA 132456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806432688177560