Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq18243 241 3e-59 seq109009 82.4 2e-11 >seq18243 Length=2233 Score = 241 bits (266), Expect = 3e-59 Identities = 330/457 (72%), Gaps = 8/457 (2%) Strand=Plus/Plus Query 4996 CGGCCGGACATCAATCAGGAGGTCTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCG 5055 || ||||||||||| ||| | ||||||||||| ||||| || || || | ||||| || Sbjct 65 CGTCCGGACATCAACCAGAACGTCTACGGCCTACCCGAATACCTTGGCGCCCTGCAGTCA 124 Query 5056 GCCTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCAC 5115 || | || ||||| | |||| |||||||| |||||||| ||| |||||| ||| Sbjct 125 GCGTTCCTCAACGAGGCCGCGACCCTGTTCCGCCGCAAGTACTACCTCAACGGCTCGCAC 184 Query 5116 GCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGC-AGGACGACGTGGACAACAT 5174 | |||||| |||||| || |||||| | | || ||| |||| || || || ||| Sbjct 185 GTCGGCTTTATCCTGCGCAGCACCGAC-CAGAACATGAGCCAGGAAGAGGTCGATGCCAT 243 Query 5175 GCGCGACGCGCTGAAGAACGCG---AAGGGGCCTGGCAACTTCCGCAACGTGTTCATGTA 5231 | | ||| || | || | |||||||| || |||||||| ||| | ||||| | Sbjct 244 ---CAAGGCGAAGATGCGCGAGGGCAAGGGGCCGGGGAACTTCCGGAACCTCTTCATCCA 300 Query 5232 CGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGGTCGCCGCGAA 5291 | | || |||||| | || | ||||||||| |||| || | |||| ||||||| || Sbjct 301 CTCACCAGGCGGGCATGAGAAGGGCATCCAGATCATTCCGATCAGCGAGATCGCCGCCAA 360 Query 5292 GGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCGCACCGCGT 5351 ||||||||| || ||||||||| ||||||| ||| | || |||||||| || || Sbjct 361 GGACGAGTTTGTCGGGATCAAGAACACCTCGCGCGACGACGTCCTGGCCGCGCATCGGGT 420 Query 5352 GCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGTACACCGGACAC 5411 |||||| ||| |||| ||||||||||| ||| | ||||| |||||| || | Sbjct 421 GCCGCCCCAGCTGCTGGGCATCGTGCCCGCCAACGCCGGCGGCTTCGGTGATGTCGATAA 480 Query 5412 CGCCGCGCGCGTGTTCGGGCGCAACGAAATCAGGCCG 5448 ||| || |||||||| ||||||||| |||| |||| Sbjct 481 GGCCTCGGCCGTGTTCGAGCGCAACGAGATCAAGCCG 517 >seq109009 Length=20967 Score = 82.4 bits (90), Expect = 2e-11 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 9385 TTGAAAATCCGCGTGTCGGTGGTTCGATTCCGCCCCAGGCCACCA 9429 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15722 TTGAAAATCCGCGTGTCGGTGGTTCGATTCCGCCCCAGGCCACCA 15766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120164311785562