Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq108070 147 7e-31 seq109401 136 1e-27 seq44576 111 5e-20 seq58301 91.5 4e-14 seq15939 86.0 2e-12 >seq108070 Length=10478 Score = 147 bits (162), Expect = 7e-31 Identities = 293/427 (69%), Gaps = 14/427 (3%) Strand=Plus/Minus Query 35456 CTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCCACCGAAGCCAGTGCA 35515 ||||||||||| | |||| ||| |||| ||||| ||||| | ||| || Sbjct 5161 CTCGACCCGCGCATGCGCGACCTGC------TGCCCGCCTACGCCACGCCGGGCAGCGCG 5108 Query 35516 GGCATGGACCTGCGTGCC-GCACTGGAGGCGCCGATGACGTTGCAGCCGGGCGATGCGGC 35574 ||| | |||||||| ||| ||| | || |||||||| || | | | |||| | | Sbjct 5107 GGCCTCGACCTGCGCGCCTGCA-TCGACGCGCCGATCACCATCGACGCCGGCGCCACCGT 5049 Query 35575 GCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGA-CCCGCAGCTGTGCGCGGTGATCC 35633 ||| ||||||| |||| | || ||||| ||||| | ||||| || | ||| |||||| Sbjct 5048 GCTCATTCCCACCGGCCTGGCCATCCACGTGGCCAATCCCGCTTATGCG-GCGATGATCC 4990 Query 35634 TGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--GGTACCGGCCT 35691 |||| ||| || | ||||| |||||||||| ||||| || |||| ||| | Sbjct 4989 TGCCCCGCAGCGGCATGGGCCACAAGAACGGCATCGTGCTCGGGAATCTGGTA--GGCTT 4932 Query 35692 CATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGGCCGCGAGGC 35751 ||||| | ||||| ||||| |||| || | |||||||||||||| | || | Sbjct 4931 GATCGACTCCGATTATCAGGGCCAGTTGATGGTATCGACCTGGAATCGCGGTCAGAAGCC 4872 Query 35752 CTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGTCGTGCGCGT 35811 ||||| |||| ||| || || | || |||||| | ||| ||||||| ||| || Sbjct 4871 GTTCACGCTCGAACCGATGGAGCGCCTGGCCCAGCTGATCATCGTGCCGGTGCTGCAGGT 4812 Query 35812 AGGCTTGCGAGTGGTGGACACTTTCGTCGACAGCGCGCGCGGCGCGGGTGGATTCGGTCA 35871 || || ||||| |||| |||| ||| || | || ||||| ||||| ||||| Sbjct 4811 CGGATTCAATGTGGTAGACAGCTTCGACGAAAGTGAACGTGGCGCCGGTGGCTTCGGCAG 4752 Query 35872 CACCGGC 35878 ||||||| Sbjct 4751 CACCGGC 4745 >seq109401 Length=19640 Score = 136 bits (150), Expect = 1e-27 Identities = 224/321 (70%), Gaps = 4/321 (1%) Strand=Plus/Minus Query 35489 CCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCG 35548 || ||||| ||||| | ||| || ||| |||||||||| ||| ||||| | | Sbjct 11601 CCCGCCTACGCCACGCCCGGCAGCGCCGGCCTGGACCTGCGCGCCTGCCTGGATGAAGCC 11542 Query 35549 ATGACGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCC 35608 || | || || ||| | || ||||||| |||| ||| | || ||||| | ||| Sbjct 11541 ATCGTGCTGGCCCCCGGCCAGACGACGCTGATCCCCACAGGCCTGGCCATCCACATCGCC 11482 Query 35609 GACCCGCAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATC 35668 |||||| ||| |||| | |||||||||||||| ||||| ||||| ||||||||| Sbjct 11481 GACCCGGGCCTGGCCGCGATCATCCTGCCGCGCTCCGGGCTGGGCCACAAGCACGGCATC 11422 Query 35669 GTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCA 35726 || || |||||| ||| ||||||||||| || |||||||| | || | | Sbjct 11421 GTGCTGGGCAACCTGGTG--GGCCTCATCGACAGCGACTACCAGGGCCAACTCATGGTGA 11364 Query 35727 GCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGC 35786 || |||||| || |||| | | ||||||||| |||| ||| || || ||||| | Sbjct 11363 GCTGCTGGAACCGGGGCCAAGCCGAGTTCACCATCCAGCCCTTCGATCGCATCGCGCAAC 11304 Query 35787 TGGTGATCCTGCCGGTCGTGC 35807 | || ||| |||| || |||| Sbjct 11303 TCGTCATCGTGCCAGTGGTGC 11283 >seq44576 Length=401 Score = 111 bits (122), Expect = 5e-20 Identities = 144/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 35487 TGCCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGC 35546 |||| ||||| |||||| | ||| || ||| |||||||||| ||| ||||| | || Sbjct 211 TGCCTGCCTACGCCACCCTCGGCAGCGCCGGCCTGGACCTGCGAGCCTGCCTGGACGAGC 270 Query 35547 CGATGACGTTGCAGCCGGGCGATGC---GGCGCTGATTCCCAGCGGCATCGCGATCCATC 35603 || |||| || ||| | | || | |||| | |||| ||||||||| ||||| | Sbjct 271 CGCTGACCCTGG---CGGCCAACGCCTGGAAGCTGGTGCCCACCGGCATCGCCATCCACC 327 Query 35604 TGGCCGACCCGCAGCTGTGC-GCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCAC 35662 |||||||||| | ||| || ||| |||| ||||||||||| || || ||||| ||| Sbjct 328 TGGCCGACCC-CGGCTACGCCGCGCTGATACTGCCGCGCTCCGGCCTGGGCCACAAGCAC 386 Query 35663 GGCATCGTACTCGGC 35677 |||||||| || ||| Sbjct 387 GGCATCGTGCTGGGC 401 >seq58301 Length=438 Score = 91.5 bits (100), Expect = 4e-14 Identities = 258/389 (66%), Gaps = 8/389 (2%) Strand=Plus/Plus Query 8769 TTCGCCGTCGCTGCTGGCGTTGAGGCCATTAGGCGTAATGCCGAGCAGCTTGACCAGCGG 8828 |||||| ||||| ||||||||||| || || | ||||||||| ||||| || Sbjct 54 TTCGCCATCGCTCGACGCGTTGAGGCCCGAGGGGGTGACGCCGAGCAGGACCACCAGGGG 113 Query 8829 AATGT--GCGAGACTGCCGCCATCTGCTCTTGCGACTGCGCCTGGAGACTATCCAACCCA 8886 ||| || ||| || || |||||||| ||||| |||| | || | | Sbjct 114 GATGCCGGCCGCGCTGGCG--ATTTGCTCTTGGCTTTGCGCGAGGAGCTTGTCGAGCGT- 170 Query 8887 GACAA-CGGCGTATTGGTCTGCTGGATCTCCTCCGTGCCCTTGTCGAGCGCGCCGATGTT 8945 | ||| |||||| || | | || |||||| || |||||| || ||| || | Sbjct 171 GCCAAGCGGCGTGCTGACGTTGTCGAGCTCCTCGGTATCCTTGTTGATCGCCATGACGCC 230 Query 8946 GCGATTGTCGCGGTACAAGTTAAACAGCTGCAAGCG-CGCGTCGAGCGACTGTGCCCCGC 9004 |||||||||||| |||||| | ||| | || ||| | |||| | || |||| Sbjct 231 GCGATTGTCGCGCGCTTGGTTAAAGATCTGGAGACGACGCAAC-AGCGGCGCGGCACCGC 289 Query 9005 CCGGCGCGAGCAGCTGCGCCATATCGGTGGCGAGATTGGTCATCGAGAACTGCTTGACCG 9064 | | ||||| | | |||| ||||| ||| || | |||||| | || Sbjct 290 CGCCGGAGAGCACCGTCCCCATGTCGGTCTTGAGTACCATCGTTGAGAACGAATGGAGGA 349 Query 9065 TATCGCTGACGGACTGACGCGTGCGCAACCAGTTGTCGACGTACGGCATGGCGAGTTGCG 9124 |||||| ||||| || || ||||| | ||| ||||||||||| ||| || | | ||||| Sbjct 350 GATCGCTTACGGATTGGCGGGTGCGTAGCCAATTGTCGACGTAGGGCTTGACCATTTGCG 409 Query 9125 AGATCGACACGCCCCGGAAACTATAGGCC 9153 ||| ||||| ||| | ||| || |||||| Sbjct 410 AGAGCGACAGGCCGCCGAAGCTGTAGGCC 438 >seq15939 Length=1178 Score = 86.0 bits (94), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 35660 CACGGCATCGTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGT 35717 ||||||||||| || |||||| ||| || || ||||| || |||||||| | Sbjct 1177 CACGGCATCGTGCTGGGCAACCTGGTG--GGTCTGATCGACAGCGACTACCAGGGCCAGC 1120 Query 35718 TGTTGATCAGCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGA 35777 || || ||||| ||||||| ||| || | | ||||||||||||| || || || Sbjct 1119 TGATGGTCAGCGCCTGGAACCGCAGCACGGTGCCCTTCACCATCGACCCCATGGAGCGCC 1060 Query 35778 TTGCGCAGCTGGTGATCCTGCCGGTCGTGC 35807 | ||||||||||| ||| ||||||| |||| Sbjct 1059 TGGCGCAGCTGGTCATCGTGCCGGTGGTGC 1030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148939064141010