Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_007809.1 Length=59446 Score E Sequences producing significant alignments: (Bits) Value seq92742 134 5e-27 seq111010 125 3e-24 seq14176 91.5 6e-14 >seq92742 Length=6105 Score = 134 bits (148), Expect = 5e-27 Identities = 224/316 (71%), Gaps = 6/316 (2%) Strand=Plus/Minus Query 16455 CGCTGTTCGCCTTCCTGACGGAGCTGACGCTGACGATCAACAACAACGTCTCGCCCAACA 16514 || ||||||| | ||| || || || | | ||||||||||||||||||| |||||||||| Sbjct 4644 CGTTGTTCGCTTACCTCACCGAACTCAAGATGACGATCAACAACAACGTGTCGCCCAACA 4585 Query 16515 AGGCGGTCGCTGTCCTCGGGGCCTTCGACGTTTCCGCAGGCACCTTCCAGGTGTCGGGC- 16573 |||| || || || || || ||||||||||| | ||||| | || | ||||| | | Sbjct 4584 AGGCCGTTGCGGTTCTTGGCGCCTTCGACGTGACGGCAGGTATTTTTGAAGTGTCTGCCG 4525 Query 16574 AACGTGACGGCCTACTTCGCGGACA-TCGCCGCGGTCCAGGCGGTGCGCAACAACTCGGA 16632 || ||| ||| ||||| | ||| ||| || |||||||| || ||||||||| | Sbjct 4524 AAGCTGA-GGCTTACTT-TAGCACAGTCGAAGCTGTCCAGGCCGTTCGCAACAACGCCAG 4467 Query 16633 CGTGACGCTGGACTTCGCCTTGGTGAAGAACAACGCCGGTCTGGTGTGGGACATCCCGCT 16692 || || | | ||| | || ||||||||| ||| | || |||||| || || Sbjct 4466 CGGTCAAATGTTCATGGCCGTTGTCAAGAACAACTATGGTTTCGTTATGGACATGCCTCT 4407 Query 16693 GCTCGCCCTGGGCGACGGACGCCTGAACGTGGAGCA-GGACCAGCCGATCACCCTGCCCC 16751 |||| || ||| ||| ||| ||||||| | || ||| || |||||| ||||| Sbjct 4406 TGTCGCTCTCGGCAACGCACGTTTGAACGT-CACCATTGACGAGGCGATCAAGCTGCCTT 4348 Query 16752 TGTCGGTGGACGCGGC 16767 || | | |||||||| Sbjct 4347 TGACACTTGACGCGGC 4332 >seq111010 Length=53734 Score = 125 bits (138), Expect = 3e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 35586 CTACCGCGAAGTGGACGCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGATTG 35645 ||||||| | ||| |||| | | |||||||||| | |||||||| |||| || Sbjct 29671 CTACCGCAAGGTGCGCGCCTGTGAGCTGTGGGACCAGGTCATGCGCTCCACCTACGACCA 29730 Query 35646 GGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTG 35705 || ||||| |||||||| ||| | ||| |||||| || |||||||| ||||| Sbjct 29731 CGCCGAGCCCGGCGTGCTCTTCCTGGACCGCATCAACAGCGACAACAACCTGCACTACTG 29790 Query 35706 CGAGACCATCGCCGCCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTG 35765 |||||| ||||| || || || || |||| ||||||||||| |||||||| || ||| Sbjct 29791 CGAGACGATCGCGGCGACCAATCCTTGCGCCGAGCAACCGCTTCCGCCCTATGGCTGCTG 29850 Query 35766 CTTGTTGGGCTCCTTCAACCTG 35787 || |||||||| || ||||| Sbjct 29851 CTGCCTGGGCTCCATCGACCTG 29872 >seq14176 Length=1367 Score = 91.5 bits (100), Expect = 6e-14 Identities = 128/179 (72%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 34117 GGCGATCCGGGCCAGCTCCCGCCCGT---GGGCGGCACCCCCTTCTTCAAGAACAAGCCC 34173 |||||||| | |||||| ||||| || ||| ||| | |||| | || | |||| Sbjct 791 GGCGATCCCGCCCAGCTGCCGCCGGTCAAGGGTGGCGGCTTCTTCACCGAGGCCGAGCCG 732 Query 34174 GACATCCTGCTCACGGAGATTCACCGCCAGGCCCAGGACAACCCGATCATCTGGATGTCC 34233 ||| | |||| ||| || | || ||||||||| ||||| |||||| || | ||||| Sbjct 731 GACGTGATGCTGACGCAGGTGCATCGCCAGGCCGCCGACAATCCGATCGTCCGCATGTCG 672 Query 34234 AAGGAGGTCCGCGAGGGCCGCGTGCTCCGCCCCGGCGACTACGGTGCCAGCCGCGTGAT 34292 | ||| ||||||||||||||| ||| | |||| ||| || | |||||||| || Sbjct 671 ATGGAAATCCGCGAGGGCCGCGCGCTTGACTACGGCACCTATGGCGAGAGCCGCGTCAT 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189854563297696