Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq110395 134 1e-26 seq58313 125 7e-24 seq107681 100 3e-16 seq70823 84.2 2e-11 >seq110395 Length=10286 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || ||||| | ||| |||||||| || |||||||| ||| Sbjct 9983 GCCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 9924 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| ||| |||||| ||||||||||| ||| |||| | |||||| || || || || Sbjct 9923 GAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGG 9864 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || |||||| ||| | | || | ||||||| || |||| Sbjct 9863 GATGCCTTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGAC 9804 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || || || || ||||| ||||||||| Sbjct 9803 CTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | |||||| ||||| || || ||||||||| | ||||| ||| || | ||| Sbjct 10187 ATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTG 10128 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||||||||| | || | ||||||||||| || ||||| ||||| ||||| ||| || Sbjct 10127 CTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTT 10068 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||||| | || | || |||| ||||||| |||| ||| | ||| || || || Sbjct 10067 AGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGT 10008 Query 131211 TAGAGTTTTTACGAAAATCTGCATG 131235 || || || ||||| || |||||| Sbjct 10007 GAGCGTCTTGACGAATATTTGCATG 9983 >seq58313 Length=1260 Score = 125 bits (138), Expect = 7e-24 Identities = 343/517 (66%), Gaps = 19/517 (4%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || || |||| |||||| |||| |||||| || |||||||||| | ||| Sbjct 110 ATACCATGTGTGCAGAAGAAAGCCGAATGGGCGCTGCGCTGGATCAACAACGGCA----- 164 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 ||||| ||||||||| ||||||| ||||| || || ||| |||| ||||| || ||| Sbjct 165 ACTTT-GCCGAGCGTTTGGTGGCATTTGCTGCGGTTGAAGGCATCTTCTTTTCGGGTAGT 223 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || | | ||||| | | |||| || | ||||| || ||||| || || ||| Sbjct 224 TTCTGCTCTATCTTCTGGCTGAAAAAACGCGGATTGATGCCAGGGCTGACTTTCAGTAAC 283 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||||||||||||||| || || ||| || ||||| || || || | || Sbjct 284 GAGCTGATATCGCGCGATGAAGGTTCGCACTGCGAATTTGCCTGCCTGCTGTACAGCATG 343 Query 46324 CGCGTGCACGACAAGCTTGCGC-CCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 | || | |||||| || || | || | || | || | || || ||||| | Sbjct 344 C---TGGAAAACAAGC-TGAGCACTGAGGCGGTCACCAAAATTATTAAAGACGCGGTAGA 399 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442 || || ||||| ||| | | | ||| ||||| | | | | || |||||||| | Sbjct 400 GATAGAAAAGGAATTTATCAGCGACGCGCTGCCGGTATCGTTAATAGGTATGAACGCCAA 459 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC 46502 ||| | | || || ||||||||||| ||| || ||| | | || | | || Sbjct 460 ACTGATGAGTCAGTATATTGAGTTTGTAGCCGACAGATGGCTGGGCGAACTGGGCTATCC 519 Query 46503 GAAGCATTTTCACGCGCGC----AATCCATTTGAGTTTATGAACAACATCTCCCTGGAGG 46558 ||| | | | ||| | || ||||| ||||| |||||| | | || || || ||| Sbjct 520 GAA--AGTAT-ACG-GTGCATCAAATCCGTTTGATTTTATGGAGATGATATCGCTACAGG 575 Query 46559 GCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||||| || ||||| || || ||||| ||||| || Sbjct 576 GCAAAACCAACTTTTTTGAGAAACGCGTGGGCGATTA 612 >seq107681 Length=5071 Score = 100 bits (110), Expect = 3e-16 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 46072 GCGTTTGA-ACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAA 46130 ||| |||| ||| || || || |||| ||||| | || |||||| || |||||||| Sbjct 3988 GCGGTTGATACG-ATTCCATGTGTGCAAAAGAAGGCAGAGTGGGCGCTGCGCTGGATCAA 4046 Query 46131 CAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtt 46190 || | ||||| || ||||||||| |||| || |||||| ||| || ||| | || Sbjct 4047 CAACGGCACC------TTTGCCGAGCGTTTGGTAGCATTTGCGGCTGTTGAAGGCATTTT 4100 Query 46191 tttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCT 46250 ||||| || || || | ||||| | | |||| ||| | |||||||| | Sbjct 4101 CTTTTCAGGGAGCTTCTGTTCTATCTTCTGGTTAAAAAAACGTGGCCTGATGCCCGGATT 4160 Query 46251 GACGTTTAGCAACGAGCTGATATCGCGCGACGAGGG 46286 ||| ||||| ||||| |||||||||||||| || || Sbjct 4161 GACCTTTAGTAACGAACTGATATCGCGCGATGAAGG 4196 >seq70823 Length=785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCG 131077 ||| || || || || | ||| ||||| || |||||||||||||| | |||| || Sbjct 335 ACGAAGGACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCC 276 Query 131078 AGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTT 131137 | |||| ||||||||||| || |||| | || ||||||||| |||||||| ||||| | Sbjct 275 A-TCCTGAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCT 217 Query 131138 TGT 131140 ||| Sbjct 216 TGT 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471356696307840