Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008207.1 Length=153766 Score E Sequences producing significant alignments: (Bits) Value seq108213 86.0 6e-12 seq40814 82.4 7e-11 seq10285 82.4 7e-11 >seq108213 Length=2622 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/155 (74%), Gaps = 5/155 (3%) Strand=Plus/Plus Query 112748 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 112807 |||| ||| |||| ||||||||| || | || || |||||||| ||||| || Sbjct 1568 TGCCGGTGGGGCC-GGGCCGTGGTTCGGGCGCCGGTTCGCTGGTGGCCTACTCGCTGCTG 1626 Query 112808 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAA-CCCGGA 112866 |||||| |||| ||| || ||||| | ||| |||||||||||||| |||| |||| | Sbjct 1627 ATCACCGACCTCGATCCGCTCCAGTACAATCTGCTGTTCGAGCGCTTCCTCAATCCCGAA 1686 Query 112867 C-CGCCCCGACTTCCCCGACATCGACGTCGACTTC 112900 | || ||| | |||||| ||||| |||||||| Sbjct 1687 CGCGTGTCGA--TGCCCGACTTCGACATCGACTTC 1719 >seq40814 Length=282 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 90077 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 90136 ||| | |||| |||| ||| || |||| ||||||||||||| ||||||||||||||||| Sbjct 29 CGGAGCGTAGCGCAGTCTGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGCAGGTTCGAA 88 Query 90137 TCCTGTCACCCCGAC 90151 ||||| | | ||||| Sbjct 89 TCCTGCCGCTCCGAC 103 >seq10285 Length=766 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 112758 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 112817 ||| |||||||||||| || | |||| |||| |||||| ||||| ||||| | Sbjct 599 GCCAGGGCCGTGGCTCGGCGGCCAACTCGGCGGTCTGCTACGTGCTGGGCGTCACCAGCA 540 Query 112818 TCGA-CCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 112876 | || ||||| | ||||||| |||||||||||||| | || ||| ||| ||| Sbjct 539 TTGATCCCGAGCGCA-ACGACCTCTTGTTCGAGCGCTTCGTATCCCAGGAGCGCAACGAG 481 Query 112877 TTCCCCGACATCGACGTCGACTTCCAG 112903 ||||||||||||||||||||| || Sbjct 480 CCGCCCGACATCGACGTCGACTTCGAG 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491239420602960