Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq110395 123 2e-23 seq106734 86.0 5e-12 >seq110395 Length=10286 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| | || || || ||||||| |||| || |||||||| Sbjct 9984 ATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTCGTCC 10043 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || | ||| || ||| ||||| ||||| || || || ||||| Sbjct 10044 GACACCATCGA-TAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCA 10102 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||||| ||||| || || ||||| | ||||| | ||||||||| Sbjct 10103 GCAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTACAA 10162 Query 25178 TATTCAAAAAGAATCCACGCTACAT 25202 ||| || || ||||| || || ||| Sbjct 10163 TATCCAGAAGGAATCGACCCTCCAT 10187 >seq106734 Length=403 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || | ||||| | || || ||||| || Sbjct 31 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACAATCACGCTGGAGGTAGAGTCTTCG 90 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| | || || | ||| ||||| ||||| || || || || Sbjct 91 GACACTATCGACAACGTCA---AGGCCAAGATTCA-GGACAAGGAAGGTATCCCCCCCGA 146 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || || |||||||| || || || || | ||||| | || || Sbjct 147 CCAACAACGTCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGGCGCACGCTCTCGGACTA 206 Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202 ||||| || || || ||||| || ||| Sbjct 207 TAATATCCAGAAGGAGTCCACCCTTCAT 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432740726946815