Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq107653 277 2e-69 seq93596 87.8 2e-12 seq70231 82.4 9e-11 >seq107653 Length=176415 Score = 277 bits (306), Expect = 2e-69 Identities = 501/721 (69%), Gaps = 25/721 (3%) Strand=Plus/Minus Query 118225 AACACGGCATTCCGTGAGATGGGTTTCTCGATCGAGAAGGTAACTGTCACAGC-ACGCGC 118283 ||||| || | | |||||||| ||| ||||||||||| || ||||| || | | || Sbjct 133160 AACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGC 133101 Query 118284 TCGCGCCCTGAAGGCAGAATACAGCATCGAGATGGCACAAGACCTGAAGGCAATTCATGG 118343 ||||| ||| || || ||| || || ||||||| |||||||||||| | || || Sbjct 133100 -CGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGG 133042 Query 118344 TCTGGATGCTGAGCAGGAGCTCGCTAACATCCTTAGCACTGAGATCCTCGCTGAAATCAA 118403 ||| || || ||| |||||| | |||||||| ||| |||||||| || || ||||| Sbjct 133041 TCTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAA 132982 Query 118404 CCGTGAGGTTGTCCGTACCATCTACACCAACGCTGTTGCA-GGTGCTCAAAACAACACCG 118462 ||| |||| || ||||| || ||| ||| ||| || | || | | |||| Sbjct 132981 CCGCGAGGCGGTTCGTACGGTCCTGACCTCCGC-CAAGCAGGGATCGCAGATCGACACGA 132923 Query 118463 CTACCGCTGGTGTATTCGACCTCGACGTTGACTCCAACGGTCGCTGGTCTGTTGAGAAGT 118522 | | | | || | |||||||| ||||| ||||| ||||| |||||||| |||||||||| Sbjct 132922 CCAACCCGGGCTTCTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGT 132863 Query 118523 TTAAGGGTCTCCTCTTCCAAATCGAGCGTGATGCCAATGCTATTGGTCATCAGACTCGTC 118582 | |||||||| ||||| |||||||| || ||| || | | |||| | | Sbjct 132862 TCAAGGGTCTGTATTTCCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGC 132803 Query 118583 GCGGGAAGGGCAACATCCTCATCTGCTCTGCTGATGTTGTTTCTGCTCTGGGTATGGCTG 118642 | || ||||| |||||||| |||||| | || || || | || |||||| | || | Sbjct 132802 GTGGCAAGGGTAACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCTG---AACGCCG 132746 Query 118643 GTGTCCTCGACTACACCCCTGCTCTGAATGGCAACAACGGTCTCGCAGGTGTTGATGACA 118702 | | | || || || ||| || |||| ||| ||| || || |||| Sbjct 132745 CCGGCTACCTCTCCATGCCGAACCTGGGTGACAAC------CTC-CAG--GTCGACGACA 132695 Query 118703 CCTCCAGCACCCTGGTTGGCACCCTTAACGGTCGTATCAAGGTCTACGTTGATCCCTACT 118762 | || |||| | | || | ||| |||||||| |||||||||||| | || |||||| Sbjct 132694 CGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC- 132636 Query 118763 CTGCAAACGTTGCTGACAAGCACTTCTACGTTGCAGGTTATAAGGGCACCAGCCCCTATG 118822 || | || || || || || | | ||| ||| || ||||| | | || || | Sbjct 132635 --GCGATCG--GCGGA-AACTACATGTGCGT---AGGCTACAAGGGTCCGACGCCTTACG 132584 Query 118823 ACGCAGGTCTCTTCTACTGCCCCTACGTCCCCCTCCAGCAGGTTCGTGCAATCAACCCTG 118882 |||| || ||||||||||||| ||||| || ||||||||||||||||| | || | Sbjct 132583 ACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGG 132524 Query 118883 ACACCTTCCAGCCCAAGATCGGCTTCAAGACTCGCTACGGCATGGTCTCGAATCCCTTCG 118942 | |||| || |||||||||||||| ||||||||||||||| |||| ||||||| Sbjct 132523 GTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCG 132464 Query 118943 C 118943 | Sbjct 132463 C 132463 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 117865 TTCGACCCTGTTCTGATCAGCCTGATCCGCCGCTCTATGCCTCAGCTGATCGCTTATGAC 117924 |||||||| | ||||||| |||| || | ||||| ||||| | ||||| || || ||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 117925 ATCGCTGGTGTGCAGCCGATGACTGGTCCTACTGGACTGATCTTCGCAATGCG 117977 ||| ||||||||||| ||||| ||||| || || ||||||||||| || || Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCG 133378 >seq93596 Length=211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 162269 TAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAATCCTG 162326 |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||| Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTG 71 >seq70231 Length=135 Score = 82.4 bits (90), Expect = 9e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 162269 TAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAATCCTG 162326 |||||||||||||||||||||||| |||||| |||| |||| ||||||||||||||| Sbjct 127 TAGCTCAGCTGGATAGAGCAACTGATTTCTAATCAGTAGGTCTCAGGTTCGAATCCTG 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566443540429600