Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq58313 168 7e-37 seq107681 165 9e-36 >seq58313 Length=1260 Score = 168 bits (186), Expect = 7e-37 Identities = 339/494 (69%), Gaps = 14/494 (3%) Strand=Plus/Minus Query 92922 ATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGAC 92981 |||| || |||||||| || || |||||| ||||| | ||||| |||| | || Sbjct 497 ATCTGTCGGCTACAAACTCAATATACTGACTCATCAGTTTGGCGTTCATACCTATTA-AC 439 Query 92982 G-TACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATT 93040 | ||| || || |||||| | | || || || || || | || || ||||| | ||| Sbjct 438 GATACCGGCAGCGCGTCGCTGATAAATTCCTTTTCTATCTCTACCGCGTCTTTAATAATT 379 Query 93041 TCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 | | || | || || | | || || | | ||| | ||||| | ||| |||| Sbjct 378 TTGGTGAC-CGCCTCAGTGCTCAGCTTGTTTTCCAGCATGCT-GTACAGCAGGCAGGCAA 321 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 | ||| || ||||||| || || ||||||| ||| || ||||| || | ||||| | Sbjct 320 ATTCGCAGTGCGAACCTTCATCGCGCGATATCAGCTCGTTACTGAAAGTCAGCCCTGGCA 261 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACCAGaaaaaaaTATACCT 93217 || ||| ||||| || ||||| || || || ||| |||||||| ||||| || || ||| Sbjct 260 TCAATCCGCGTTTTTTCAGCCAGAAGATAGA-GCAGAAACTACCCGAAAAGAAGATGCCT 202 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCAT 93277 || || || ||||||||||| | ||| |||||||| || || || ||||||| Sbjct 201 TCAACCGCAGCAAATGCCACCAAACGCTCGGCAAAGTTGCCG------TTGTTGATCCAG 148 Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337 | ||||| |||||||| |||| | ||| |||| || |||||||||| || | Sbjct 147 CGCAGCGCCCATTCGGCTTTCTTCTGCACACATGGTATGGTGTCGATAGCGTGGAACAAC 88 Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397 ||| ||| ||| ||| || ||| || ||||| |||| || || |||| || Sbjct 87 CGATCCTTTTCGGCCGGGTCTTTTACGTAAGTGTCGATCAACAAAGCGTAGGTTTCCGAG 28 Query 93398 TGGACATTCTCCAT 93411 |||| ||||||||| Sbjct 27 TGGATATTCTCCAT 14 >seq107681 Length=5071 Score = 165 bits (182), Expect = 9e-36 Identities = 509/778 (65%), Gaps = 16/778 (2%) Strand=Plus/Minus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACG-TAC 92985 ||||| ||||| || ||||| || |||||| | | ||||| |||| | ||| ||| Sbjct 4382 TCAGCCACAAACTCAATGTATTGGCTCATCAATTTAGCGTTCATCCCTATTA-ACGATAC 4324 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || | |||||||| | || ||||| || || | || || || | | |||| | Sbjct 4323 CGGCAATGCGTCGGTAATAAATTCTTTTTCAATCTCTACCGCGTCGGTAATAATTTTGGT 4264 Query 93046 TACT-CTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGG 93104 ||| || || | | || || | | |||| ||| | | ||| ||||| ||| Sbjct 4263 AACTGCTTCTGTGCTCAGTTTATTCTCCAGCATACC-GTAAAGCAGGCAGGCAAATTCGC 4205 Query 93105 TATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTC 93164 ||| ||||||| || || ||||||| || || || || || || || || | ||| | Sbjct 4204 AGTGTGAACCTTCATCGCGCGATATCAGTTCGTTACTAAAGGTCAATCCGGGCATCAGGC 4145 Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGG 93224 | ||||| || | ||| || || ||| || || || ||||| || || ||||| || | Sbjct 4144 CACGTTTTTTTAACCAGAAGATAGAACAGAAGCTCCCTGAAAAGAAAATGCCTTCAACAG 4085 Query 93225 CTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAG 93284 | |||||||| || | ||| |||||||| | || || ||||||| | | Sbjct 4084 CCGCAAATGCTACCAAACGCTCGGCAAAGGTGCCGT------TGTTGATCCAGCGCAGCG 4031 Query 93285 CCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 |||| || || || || | | ||| || | || || | |||| || | |||| Sbjct 4030 CCCACTCTGCCTTCTTTTGCACACATGGAATCGTATCAACCGCGTGGAACAAACGATCTT 3971 Query 93345 GCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACAT 93404 || ||| ||| ||||| ||||| || | || | || | || || |||| | Sbjct 3970 TTTCAACCGGGTCTTTAATGTAAGTATCTATCAGTAGCGCGTAGGTCTCTGAGTGGATGT 3911 Query 93405 TCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT-TGA 93463 ||||||| || || || ||||| || || | ||||| | | ||||| || | | Sbjct 3910 TCTCCATCATGATCTGAAAACCGTAAAAGCAACGGGCTTCGGGTAATTGCACCTCGCTCA 3851 Query 93464 GAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAAT 93523 || | || | | || ||||| || || ||||||||| || ||||||||||||| Sbjct 3850 TGAAGT-TCACAGCAAGGTTTTCGTTCACAATACCATCGCTGGCGGCAAAAAAAGCCAGG 3792 Query 93524 ATATGCTTTATAAAATGTTTCTCATCATCTTTAA--GCTTATCCCAATCGGATAGATCTT 93581 || ||| || ||||||||||| | || | ||| ||||||| || || | Sbjct 3791 ATGTGCGAAATGAAATGTTTCTCGCCCGGGTTCATGGCT--TCCCAATGTTTCAGGTCGT 3734 Query 93582 TTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCC 93641 || || || | ||||||| | |||||||| ||||| | |||||| ||||| |||| Sbjct 3733 CCGACAGGTCAATTTCTTCGGCTGTCCAAAAGCTGGCTTCCGATTTTTTATACATCTCCC 3674 Query 93642 ATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAA 93699 | || | | |||| || |||| ||| ||||| |||| ||| ||| ||| ||| Sbjct 3673 AAATAGCAGGGTATTTTATAGGAAGTATTACAAAGCGATCTTTGTTCTCTCTTAATAA 3616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556086756527240