Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq110395 131 1e-25 seq106734 104 2e-17 seq6868 96.9 3e-15 seq70823 86.0 5e-12 >seq110395 Length=10286 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | || || || ||| |||| || || || ||| | || Sbjct 9756 ATGCAGATCTTCGTTAAGACGCTTACTGGGAAGACGATCACCCTCGAGGTCGAATCGTCC 9815 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||| || || ||||| || || || ||||||||| Sbjct 9816 GATACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAAGGCATCCCCCCCGATCAA 9875 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || |||||||| ||| | ||||| || ||| ||||||| |||||| Sbjct 9876 CAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACCCTCTCCGACTACAAC 9935 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||||| | ||||| || | || | ||||| || Sbjct 9936 ATCCAGAAGGAGTCCACCCTCCATTTGGTCCTCCGTCTTCGCGGCGG 9982 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || |||| || || || || | || Sbjct 9984 ATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTCGTCC 10043 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || |||||||| || || || ||||| || Sbjct 10044 GACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 10103 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| ||||| ||||| || || |||||| ||||||||||||| Sbjct 10104 CAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTACAAT 10163 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || ||||| ||| | ||| Sbjct 10164 ATCCAGAAGGAATCGACCCTCCAT 10187 >seq106734 Length=403 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || |||| || || || || | | Sbjct 30 GATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACAATCACGCTGGAGGTAGAGTCTTC 89 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | ||| | |||| || ||||| |||||||| ||||| || ||||| || Sbjct 90 GGACACTATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCCGACCA 149 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||||||||| || || |||||||| ||||| ||||| ||||| |||| || || || Sbjct 150 ACAACGTCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGGCGCACGCTCTCGGACTATAA 209 Query 22398 CATTCAAAAAGAATCCACCATACAT 22422 || || || || |||||| | ||| Sbjct 210 TATCCAGAAGGAGTCCACCCTTCAT 234 >seq6868 Length=121 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || || || ||||| | |||||||| | ||| | | || ||||||||||||||| Sbjct 2 ACGCTGGAGGTGGAGTCATCCGATACCATTGACAACGTGAAGGCCAAAATTCAAGACAAG 61 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 |||||||| || ||||| |||||||||||||| || |||||||| ||| | ||||| Sbjct 62 GAGGGTATCCCGCCCGACCAACAACGTCTTATTTTCGCCGGCAAGCAGCTCGAGGA 117 >seq70823 Length=785 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||| || || ||||| || || | || || || || | || | || || || | || Sbjct 119 GATACAGATATTTGTCAAGACCCTCACAGGGAAGACTATTACATTAGAGGTTGAGCCAAC 178 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | | | || | ||| || ||||| ||||||| || || || || || || Sbjct 179 TGATACCATTGGCAATGTGAAAGCCAAGATTCAGAACAAGGAAGGCATCCCTCCTGACCA 238 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || |||| || ||||| ||||| ||| | ||||| | |||| | || |||||||| Sbjct 239 GCAGTGTCTCATCTTTGCTGGCAAGCAGCTTCAGGATGGCTGCACTCTTTCAGATTACAA 298 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||| ||||| || ||| | || || || Sbjct 299 CATTCAGAAAGAGTCTACCCTTCACTTGGT 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419159158512565