Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq103458 105 1e-17 >seq103458 Length=5285 Score = 105 bits (116), Expect = 1e-17 Identities = 199/285 (70%), Gaps = 16/285 (6%) Strand=Plus/Minus Query 293032 GTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCATAGACTTC---AGTGTG 293088 || || ||||| ||||||||| ||||||| ||||| |||| ||| | |||||| Sbjct 2938 GTCTTCAGACCTTTCTTCCATCCGTAGAAATGCATACTCGTCA---ACTGCGCAAGTGTG 2882 Query 293089 GGAGTGGCCAGGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCA 293148 || | || ||| || ||| | ||||| | ||| | ||||| |||||||| || Sbjct 2881 GGGGAGGGCAGATGAACGTTTAGACTCTGAGACTGGCAAATGAAGGCTCCACGATCTGCG 2822 Query 293149 GCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGAC- 293207 |||||||||| ||| ||||| ||||||||||| |||||||| | || ||||| Sbjct 2821 GCGAGGTCAAGGACTTTCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCTTTGACG 2762 Query 293208 --ATCA-GGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTT 293264 ||| ||||| || ||| ||||| ||||| || || ||||| ||| ||| Sbjct 2761 TGGTCAGGGATG-TTGGGGATA---TTCTGAATAGAACCATTGTGCGCAATGATCATGTT 2706 Query 293265 CTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGA 293308 |||||| ||| ||| ||||| | || | | ||||||||||| Sbjct 2705 CTTCATCTGGTCGTTCCAGAGTCCGA-GATCGACGAGCTCGCGGA 2662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026372376350041