Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08]
111,201 sequences; 70,469,476 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq110395 87.8 2e-12
seq70823 86.0 5e-12
>seq110395
Length=10286
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| ||||| || || | | || ||||| | || || || || || |||||||| |||
Sbjct 9985 ATGCCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 9926
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| || || || || || || ||| |||| ||||||||||| || ||
Sbjct 9925 GAGAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGG 9866
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|| |||||||| || || || ||| | ||| | | || | ||| |||| |||||
Sbjct 9865 GGGATGCCTTCCTTATCCTGGAT-TTTGGCCTTAACGTTGTCGATGGTATCGGACGATTC 9807
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||| || | ||| | ||| || || || || || || || || |||||||||
Sbjct 9806 GACCTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCATG 9755
>seq70823
Length=785
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| ||||| |||||||||||||| | ||| | ||| | ||| || || |||
Sbjct 316 GTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCCTGAAGCTGCTTGCCA 257
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||| ||| ||||| ||||| |||||||| |||| |||||| |||
Sbjct 256 GCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGTTCTGAATCTTGGCTTTC 197
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| ||| || || | || || || | || | || || || || || ||
Sbjct 196 ACATTGCCAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTCTTCCCTGTGAGGGTC 137
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||| ||
Sbjct 136 TTGACAAATATCTGTAT 120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419565007734012
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |