Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq18243 125 2e-24 >seq18243 Length=2233 Score = 125 bits (138), Expect = 2e-24 Identities = 266/389 (68%), Gaps = 10/389 (3%) Strand=Plus/Minus Query 11387 GCCCCCGCCATTGGTGGGGATAATGCCGGCCAGCGCTGGCGGGTACCGATGCGCCGTCAG 11446 ||| ||| | |||| ||| | ||||| |||| ||||| ||||||||| | ||| Sbjct 463 GCCGCCGGCGTTGGCGGGCACGATGCCCAGCAGCTGGGGCGGCACCCGATGCGCGGCCAG 404 Query 11447 CACATCCTGGGCAGTGATCCCCTTGATAGCCGCGAACTCGTCCTTGGTTGCGATGTCCCC 11506 || || | | | | | |||||| | | ||||||||||||| ||||| || | Sbjct 403 GACGTCGTCGCGCGAGGTGTTCTTGATCCCGACAAACTCGTCCTTGGCGGCGATCTCGCT 344 Query 11507 CACCGGGATGAGCTTGATGCCATCGGGCTTGCCATC--GGGGATGTTCACGAACATCGAG 11564 | ||| |||| || |||||| | | |||| | || || || | ||| | Sbjct 343 GATCGGAATGATCTGGATGCCCTTCT-CATGCCCGCCTGGTGA-GTGGATGAAGAGGTTC 286 Query 11565 CGGAAGTTCCCTACCCCTTTGGAGTTCGCG-ATCATCTCCTTCATCTCCTCTTCGGTGTC 11623 ||||||||||| ||| ||| | |||| ||| || |||| || | || | || Sbjct 285 CGGAAGTTCCCCGGCCCCTTGCCCT-CGCGCATCTTCGCCTTGATGGCATCGACCTCTTC 227 Query 11624 GTCGTCCATGTTGGGGTCGGTC--GCGTAGAAGATGAACCCCATGTGGGCGCCGTTGAGG 11681 | | |||||| ||||||| ||| || ||| || || | ||| | |||||||||| Sbjct 226 CTGGCTCATGTTCTGGTCGGTGCTGCGCAG--GATAAAGCCGACGTGCGAGCCGTTGAGG 169 Query 11682 AAGTAGCGGCGTCGGAACAGGGTGGCGTCCTGGTTGAGCAGCGCAGACTGCAGGCCGCCA 11741 |||| ||| ||||||||||| ||| ||| |||||| | ||| ||||||||| ||||| Sbjct 168 TAGTACTTGCGGCGGAACAGGGTCGCGGCCTCGTTGAGGAACGCTGACTGCAGGGCGCCA 109 Query 11742 AGGTAATCGGGCATGCCATAGACCTGCTG 11770 ||||| ||||| | ||| ||||| | ||| Sbjct 108 AGGTATTCGGGTAGGCCGTAGACGTTCTG 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108486952266814