Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq110395 163 7e-35 seq106734 145 2e-29 seq11946 116 9e-21 seq38326 104 6e-17 seq83150 100 7e-16 seq109776 95.1 3e-14 >seq110395 Length=10286 Score = 163 bits (180), Expect = 7e-35 Identities = 176/232 (76%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || || | ||| | ||| || || ||||| || |||| Sbjct 9986 CATG-CCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGT 9928 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || ||||| || | || || || |||||||| |||||||||||| Sbjct 9927 CGGAGAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGG 9868 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| ||||| |||||||||||||| || || ||||| || || | |||| ||||| Sbjct 9867 GGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATT 9808 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| |||||||||||||| || || ||||| ||||| |||||||| Sbjct 9807 CGACCTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||| || |||| ||||||||| |||||||| || || || ||||| || Sbjct 10175 TTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAA 10116 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| ||||| || ||||| ||||| || |||||||| || || || ||||| Sbjct 10115 AATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTT 10056 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| || || ||||| ||||| |||||||| || || |||||||| Sbjct 10055 ATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGTGAGCGTCTTGAC 9996 Query 288462 GAATATCTGCAT 288473 |||||| ||||| Sbjct 9995 GAATATTTGCAT 9984 >seq106734 Length=403 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| ||| || || |||||||||||||| | ||||||||| ||||| || | Sbjct 238 CGAGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCA 179 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 | || || || |||||||||||||| ||||| ||||| ||||| || ||||| | Sbjct 178 ACTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAA 119 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || ||||| || |||| || || ||||| || |||||||| ||||| | Sbjct 118 TCTTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGC 59 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| || || |||||||| Sbjct 58 CCGTGAGCGTCTTCACAAAGATCTGCAT 31 >seq11946 Length=4023 Score = 116 bits (128), Expect = 9e-21 Identities = 273/410 (67%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 72410 AATTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGA 72469 ||| | ||| || || | || || ||||||||| || |||| | |||||| | || Sbjct 2401 AATATACCAGGCATCCACATCCGAATTGTATGGATTGGTTCAAGCTGTCCCTCAGTCAGA 2460 Query 72470 AAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGAT 72529 || ||||||||||||||| || || |||| |||||||| | || || |||||||| Sbjct 2461 AACTACTCCGTTTTATCCGCGGTCGCCCTACGCAGTTGCAAAACTCTATGCCTATTGGAT 2520 Query 72530 --CTGTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAAT 72587 | || |||||| || || | ||| ||||| || |||||| ||| || ||| Sbjct 2521 AACCGT--AAATTATCGCGAAGCCTATGGCATGTTTGCTTGCAACGGGATACTATTTAAT 2578 Query 72588 CACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCG 72647 || || ||||| | ||| | || || || |||||||| ||| | | || Sbjct 2579 CATGAAAGTCCATTGCGGGGCGAAACTTTTGTTACACGTAAAATAACGCGCGCTGCGGCC 2638 Query 72648 AATATTTTCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGAT 72707 || ||| | ||| | |||| ||||| | |||||| | ||||| || | ||| Sbjct 2639 AAAATTGCCTTGGGTTTACAAAATAAATTGTATTTGGGTAATCTTGATGCACAACGGGAT 2698 Query 72708 TGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCG 72767 ||||| |||| || || || || || ||||||| | || || || |||||| || Sbjct 2699 TGGGGGCATGCAAAAGACTATGTCGAGGCAATGTATCTTATTCTTCAGCAAGATGAACCA 2758 Query 72768 GATGACTATGTGATTGCAACAGGGAAAACAACGAGCGTTCGTGAGTTCGT 72817 || || | ||| || || || || |||||| || || | ||||| || Sbjct 2759 GAAGATTTTGTAATAGCCACCGGCGTAACAACAAGAGTGAGAGAGTTTGT 2808 >seq38326 Length=18890 Score = 104 bits (114), Expect = 6e-17 Identities = 219/325 (67%), Gaps = 4/325 (1%) Strand=Plus/Minus Query 167025 TTCGTTGGCATCACCGAGACGAAATTACATCCATATTGTTTTCTGTAAGCATCACACATC 167084 || || ||||||||||||| | ||||||||||||||| | ||||||||| ||||| Sbjct 10774 TTAGTAGGCATCACCGAGATATAGTTACATCCATATTGTGCACGGTAAGCATCGCACATT 10715 Query 167085 TCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTGGGTTCGAGAAATCCTGTC 167144 | || || || ||||| || || ||||| || | ||||| || || || || || || Sbjct 10714 TTTATGCCTGCAATTTTAGCAATGGCGTAAGGCTCATTAGTAGGCTCAAGTAAACCCGTT 10655 Query 167145 ATCAGATATTCTTCCTTGATAGGATTTTGAGCTTCTTTTGGGTAAATGCAACTGCTACCG 167204 | ||| || || ||||| | || | | | || ||| || || || ||||| || Sbjct 10654 AACAGGTAATCCTCCTTTAATGGCTGTGGCGCCATTTTAGGATAGATACAACTTGATCCT 10595 Query 167205 AGAAACACGAGTTT--TTTCACTCCGAACATTTTGGACGCATGAATGACATTCGTCTGAA 167262 | ||||| || || || |||| || | | || | ||| || || || | || | Sbjct 10594 AAAAACATTAGCTTGGTTACACTATTAAGA--TACGATGAATGTATAACGTTATTTTGTA 10537 Query 167263 TCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTCGCGTGAATACCTCCTA 167322 | ||||| |||| | ||| ||| | | | | ||| ||||| ||| || || | Sbjct 10536 TTTGAAGATTCTCGTACAAAAAGTCGGCGCGATACGTGTTATTCGCTACAATGCCGCCCA 10477 Query 167323 CTTTTGCAGCCGCGAGAAATACGTA 167347 |||| ||||| || ||||| || || Sbjct 10476 CTTTAGCAGCAGCAAGAAAAACATA 10452 >seq83150 Length=232 Score = 100 bits (110), Expect = 7e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 72700 AAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAG 72759 || ||||||||||| |||| || |||||||| ||||| |||| || || || ||||| | Sbjct 4 AACGAGATTGGGGACATGCTAAAGATTACGTTGAAGCGATGTATTTAATACTTCAACAGG 63 Query 72760 ATACTCCGGATGACTATGTGATTGCAACAGGGAAAACAACGAGCGTTCGTGAGTTCGTGA 72819 ||| || || ||||| || |||||||| || ||| || | || || ||||||||| Sbjct 64 ATATACCAGACGACTACGTTATTGCAACGGGTGTAACTACACGTGTGCGAGAGTTCGTGC 123 Query 72820 AAATGGCATTCGGTG 72834 |||||||| |||| Sbjct 124 GTATGGCATTTGGTG 138 >seq109776 Length=48066 Score = 95.1 bits (104), Expect = 3e-14 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| ||| | || ||| || || || |||||||| ||||| || | | Sbjct 3739 ATCGGCATGAACGCCAAACTAATGTGCCAGTACATTGAATTCGTCGCTGACCGGTTGCTA 3680 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | || ||||| ||||||| | ||||| || | ||| || |||| ||| ||||| | Sbjct 3679 ATTGCTCTCGGCAATGAGAAGATTTACAAGTCTACGAACCCATTCGACTTCATGGATATG 3620 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTC--GAAAAGCGTGTCAG 269315 || || ||| | || ||||| ||||||||| |||| ||||||||| Sbjct 3619 ATCTCACTCCAGGGCAAGACTAACTTCTTCGAGAAACGCGTGTCAG 3574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177973672279278