Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq111010 122 3e-23 seq92742 120 1e-22 seq14176 89.7 2e-13 >seq111010 Length=53734 Score = 122 bits (134), Expect = 3e-23 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 6559 CTACCGCGAAGTGGACGCCCGGGCGCTTTGGGACGCGATCATGCGCGGGACCTGGGATTG 6618 ||||||| | ||| |||| | | ||| |||||| | |||||||| |||| || Sbjct 29671 CTACCGCAAGGTGCGCGCCTGTGAGCTGTGGGACCAGGTCATGCGCTCCACCTACGACCA 29730 Query 6619 GGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTG 6678 || ||||| |||||||| ||| | ||| |||||| || |||||||| ||||| Sbjct 29731 CGCCGAGCCCGGCGTGCTCTTCCTGGACCGCATCAACAGCGACAACAACCTGCACTACTG 29790 Query 6679 CGAGACCATCGCCGCCACGAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTG 6738 |||||| ||||| || || || || |||| ||||||||||| |||||||| || ||| Sbjct 29791 CGAGACGATCGCGGCGACCAATCCTTGCGCCGAGCAACCGCTTCCGCCCTATGGCTGCTG 29850 Query 6739 CTTGTTGGGCTCCTTCAACCTG 6760 || |||||||| || ||||| Sbjct 29851 CTGCCTGGGCTCCATCGACCTG 29872 >seq92742 Length=6105 Score = 120 bits (132), Expect = 1e-22 Identities = 217/312 (70%), Gaps = 4/312 (1%) Strand=Plus/Minus Query 46108 TGTTCGCCTTCCTGACGGAGCTGACGCTGACGATCAACAACAACGTCTCGCCCAACAAGG 46167 ||||||| | ||| || || || | | ||||||||||||||||||| ||||||||||||| Sbjct 4641 TGTTCGCTTACCTCACCGAACTCAAGATGACGATCAACAACAACGTGTCGCCCAACAAGG 4582 Query 46168 CGGTCGCGGTCCTCGGGGCCTTCGACGTTTCCGCGGGCACCTTCCAGGTGTCGGGTAACG 46227 | || ||||| || || ||||||||||| | || || | || | ||||| | | | Sbjct 4581 CCGTTGCGGTTCTTGGCGCCTTCGACGTGACGGCAGGTATTTTTGAAGTGTCTGCCGAAG 4522 Query 46228 TCACGGCCTACTTCGCGGACA-TCGCGGCGGTCCAGGCGGTGCGCAACAACTCGGACGTG 46286 ||| ||||| | ||| ||| || |||||||| || ||||||||| | || Sbjct 4521 CTGAGGCTTACTT-TAGCACAGTCGAAGCTGTCCAGGCCGTTCGCAACAACGCCAGCGGT 4463 Query 46287 ACGCTGGACTTCGCCTTGGTGAAGAACAACGCCGGTCTGGTATGGGACATCCCGCTGCTC 46346 || | | ||| | || ||||||||| ||| | || |||||| || || || Sbjct 4462 CAAATGTTCATGGCCGTTGTCAAGAACAACTATGGTTTCGTTATGGACATGCCTCTTGTC 4403 Query 46347 GCCTTGGGCGACGGACGCCTGAACGTGGAGCA-GGACCAGCCGATCACCCTGCCCCTGTC 46405 || | ||| ||| ||| ||||||| | || ||| || |||||| ||||| || | Sbjct 4402 GCTCTCGGCAACGCACGTTTGAACGT-CACCATTGACGAGGCGATCAAGCTGCCTTTGAC 4344 Query 46406 GGTGGACGCGGC 46417 | |||||||| Sbjct 4343 ACTTGACGCGGC 4332 >seq14176 Length=1367 Score = 89.7 bits (98), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 5081 CTCGCCCTGGGCGATCCGGGGCAGCTCCCGCCCGT---GGGCGGCACCCCCTTCTTCAAG 5137 |||| || |||||||| | ||||| ||||| || ||| ||| | |||| | || Sbjct 800 CTCGTGCTCGGCGATCCCGCCCAGCTGCCGCCGGTCAAGGGTGGCGGCTTCTTCACCGAG 741 Query 5138 AACAAGCCCGACATCCTGCTCACGGAGATTCACCGCCAGGCCCAGGACAACCCGATCATC 5197 | |||| ||| | |||| ||| || | || ||||||||| ||||| |||||| || Sbjct 740 GCCGAGCCGGACGTGATGCTGACGCAGGTGCATCGCCAGGCCGCCGACAATCCGATCGTC 681 Query 5198 TGGATGTCCAAGGAGGTCCGCGAGGGCCGCGTGCTCCGCCCCGGCGACTACGGGGCCAGC 5257 | ||||| | ||| ||||||||||||||| ||| | |||| ||| || | ||| Sbjct 680 CGCATGTCGATGGAAATCCGCGAGGGCCGCGCGCTTGACTACGGCACCTATGGCGAGAGC 621 Query 5258 CGCGTGAT 5265 ||||| || Sbjct 620 CGCGTCAT 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187352271972250