Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq109776 118 1e-21 seq108210 91.5 2e-13 seq110268 86.0 7e-12 seq92997 86.0 7e-12 seq93000 84.2 3e-11 >seq109776 Length=48066 Score = 118 bits (130), Expect = 1e-21 Identities = 334/506 (66%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 || ||||| ||| |||||| ||||| || || || || ||||||||||| |||||| Sbjct 3927 CCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTTC 3986 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||| ||| ||||| || || ||||| ||||||||||| ||||| || || || Sbjct 3987 TTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAAA 4046 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCATCGCCCAC 126241 || | ||| ||||||||||| || | ||| |||| || ||| | ||||| Sbjct 4047 GCGATGAGGCGCTCAGCAAACGA---AGTCTTCTTGTCCGAAATCCAGCGAAGAGCCCAT 4103 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 126301 | || || || || ||| || | ||||| || || || || || | | ||| Sbjct 4104 TCTGCTTTGCGCTTGACACAGGGAATGGTCTCGACAGCGTCGAAAAGGTATTCACGTTCA 4163 Query 126302 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTC 126360 | || ||||| ||||| |||| ||||| || || || ||| ||| | | | | Sbjct 4164 GCAGGGTCTTTAATGTAAGTATCAATGAGAAGCGAGTAGGTCTCGGAGTGAATGTTCTCC 4223 Query 126361 ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC-GCTTATCTGTACCTCATCGGCAA 126419 || || | ||| | ||||||| |||| || || || | || ||||||| | | Sbjct 4224 ATCAT-GATTTGAAAACCGTAGAAGCAGCGAGCCTCTGCGGCT-TGGACCTCATTCGAGA 4281 Query 126420 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 126479 | | || ||||| || || ||||| || | ||||| || || |||| || Sbjct 4282 AGCGCTCGACGAGGTTCTCGTTGACGATACCATCAGAGGCTGCAAAGAAAGCGAGGACAT 4341 Query 126480 ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCTTCG 126536 ||||| | | || || ||||| | || |||||||||| | | |||||| | Sbjct 4342 GAGAGATGAAATGACGCTCGTTGTCGTTGAGGCGGTTCTTCCAGTCATGTAAATCCTTTG 4401 Query 126537 AGAGATCTACCTCCTCCGCAGTCCAA 126562 |||| || | |||||| ||||||||| Sbjct 4402 AGAGGTCCATCTCCTCTGCAGTCCAA 4427 >seq108210 Length=3986 Score = 91.5 bits (100), Expect = 2e-13 Identities = 342/526 (65%), Gaps = 14/526 (3%) Strand=Plus/Plus Query 10742 ATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCT 10801 |||| |||||| ||||| | | ||| ||| || | | || || || || || || Sbjct 3357 ATCTGCTCGCGGCCGCGGATATCGGGCAGGCCGACCATCACCTGGCGGTCGAAACGGCCC 3416 Query 10802 GGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATG 10861 || || || | || | || || | || |||||| || || || | ||| | | | Sbjct 3417 GGACGCAGCAACGCTTTATCGAGCACGTCGGCGCGGTTGGTGGCGGCCACGACGATCACG 3476 Query 10862 CCCGT-CTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCG 10920 |||| |||| | ||||| || |||||||| || | |||||| | ||| |||||||| Sbjct 3477 CCCGAGCTCGCT-TCAAAACCGTCCATCTCGACCAGCAATTGATTCAAGGTCTGTTCGCG 3535 Query 10921 TTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCA 10978 ||||| || | | ||| || || | ||| || || |||||||| || || Sbjct 3536 CTCATCGTTACCA--CCGCCCATGCCGGCGCCGCGATGACGGCCCACGGCGTCGATCTCG 3593 Query 10979 TCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTC 11038 |||||||| | ||| || || | || ||| |||||| ||||| || || | | Sbjct 3594 TCGATGAAGATGATGCAAGGCGAGTGTTTCTTGGCGTTTTCAAACATATCGCGCACGCGC 3653 Query 11039 TTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGG 11097 ||| || || || ||||||||||| || || | | | | | || | || ||| || Sbjct 3654 GAGGCGCCCACGCCGACAAACATTTCGACGAAGTCCGAACCCG-AGATCGAGAAGAACGG 3712 Query 11098 GACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCC 11157 || |||| ||| || || ||||| || || || || || || || || || || ||| Sbjct 3713 CACCTTGGCTTCGCCGGCAATGGCGCGCGCCAGCAGCGTTTTACCGGTGCCTGGCGGCCC 3772 Query 11158 TGCGAGAAGGGCACCACGTGGGATCCTGGCACC-ACTTCC--AAAGTAGCGCTCAGGTTG 11214 | | || | || || || |||| | | || | || | || | | | || | Sbjct 3773 CACCATCAGCACGCCGCGCGGAATCCGGCCGCCGAGTTTCTGGAATTTGGTC---GGATC 3829 Query 11215 TTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCAGCGTCG 11260 || |||||||| |||||||| | | ||| |||||||| ||||| Sbjct 3830 CTTGAGGAAGTCGACGATTTCGTTGACTTCTTCCTTCGCTTCGTCG 3875 >seq110268 Length=37665 Score = 86.0 bits (94), Expect = 7e-12 Identities = 173/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 172712 TGTTGAAGACCCAAGATCTTCTTGA-GATCATTGAA-CTCTTGGTTTGATGTGAGTTGCG 172769 || || || |||| ||||||||||| | || |||| ||||| |||| ||| ||| Sbjct 13117 TGCTGGAGTCCCATGATCTTCTTGATGTTC--TGAATCTCTTCGTTTTTCATGATTTGAT 13174 Query 172770 CCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGAT 172829 | || || || ||||| | || || || || ||||| |||||| ||| | Sbjct 13175 CATGCTTCGCGTCTCGCACATTCAGAGGTTTGCCGCGCAGCGGGAAAACACCGAAGTTGT 13234 Query 172830 CACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCA 172889 | ||||| || ||| ||||||||| || ||||| | ||| || || || || || |||| Sbjct 13235 CTCGACCGACAACACCAAGACCAGCGACAGCGAGAGCCTTGGCAGAGTCGCCTTCAGTCA 13294 Query 172890 CGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGG 172949 ||||| || || | | | ||| |||||| || |||||||| ||| || ||||| Sbjct 13295 GAATGAGGGTGCATTGATCTGCGTGTTTCGTCCCAGCGTTGTTCGCGTCGCACAGCTTGG 13354 Query 172950 GAATACCAGTAAT 172962 | ||||| || Sbjct 13355 CTAACCCAGTGAT 13367 >seq92997 Length=357 Score = 86.0 bits (94), Expect = 7e-12 Identities = 181/264 (69%), Gaps = 12/264 (5%) Strand=Plus/Minus Query 10729 GTGGACACCCAAAATCTTCTCGCGACCGCGCACA-CTGGGTAGGGACACGGTGATCTTAC 10787 |||||| | | |||||||||||||||| || | |||| || ||| || || || Sbjct 262 GTGGACGCGGATGATCTTCTCGCGACCGCCGACGTCCGGGTTCGG-CACCACGACCTGAC 204 Query 10788 GATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCG 10847 | || ||||| || || || || ||||| ||| || | || ||||| || || | Sbjct 203 GGTCGAAGCGGCCCGGACGCAGCAGGGCCGGGTCCAGCACGTCGGGACGGTTGGTGGCGG 144 Query 10848 CGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGAT 10904 |||| | | |||||| ||||| || ||||| |||||||| || ||||| | Sbjct 143 CGATCAGGATGATGCCT---TCGTTGGCCTCGAAGCCGTCCATCTCGACCAGCAGTTGGT 87 Query 10905 TGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACC 10962 ||| ||| || ||||| || || || || | ||| || || | ||| || ||| Sbjct 86 TGAGGGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCGGCGCCGCGATGGCGACC 29 Query 10963 GACGGCGTCAATTTCATCGATGAA 10986 ||||||||| ||||| |||||||| Sbjct 28 GACGGCGTCGATTTCGTCGATGAA 5 >seq93000 Length=585 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 10787 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 10846 || || ||||| || ||||| || ||||| ||| ||||| || ||| || || ||| Sbjct 204 CGGTCGAAGCGGCCCGGGCGCAGCAGGGCCGGGTCCAGGATGTCGGGGCGATTGGTGGCC 145 Query 10847 GCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTG 10906 |||||||| | || |||| | | | |||||||| |||||||| || | || || Sbjct 144 GCGATGACGATGACGCCCAGGTTGGTGTCAAAGCCGTCCATCTCGACCAGCATCTGGTTC 85 Query 10907 ATGGTTTGTTCGCGTTCATCATT--CG-CGGGCATACCACCCGCACTGCGTTGCTTACCG 10963 | || |||||||| || || || || || || |||| || | || || ||| Sbjct 84 AGCGTCTGTTCGCGCTCGTCGTTGCCGCCGCCCAGACCA---GCGCCACGATGGCGGCCG 28 Query 10964 ACGGCGTCAATTTCATCGATGAA 10986 |||||||| ||||| |||||||| Sbjct 27 ACGGCGTCGATTTCGTCGATGAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596523271029080