Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq110673 168 1e-36 seq111164 98.7 1e-15 seq108438 96.9 5e-15 seq40814 91.5 2e-13 seq38494 86.0 9e-12 seq107030 84.2 3e-11 >seq110673 Length=5201 Score = 168 bits (186), Expect = 1e-36 Identities = 319/452 (71%), Gaps = 17/452 (4%) Strand=Plus/Minus Query 41404 CAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAAGACGTGTGGATCATGCTGCATAG 41463 |||||||||||| || ||||| ||||| || | | ||||||| |||||||||| Sbjct 451 CAACCACTTCATCGAGGTGTGCCTGGACGAGGCAGGTGCCGTGTGGTTCATGCTGCACTC 392 Query 41464 CGGTTCGCGCGGTGTGGGCAACATCATCGGCCGTCACTACATCGAGCGTGCGCAGAAGGA 41523 ||||||||||| ||||||||| ||||||| |||| |||||||| || ||||||| Sbjct 391 GGGTTCGCGCGGCGTGGGCAACGCCATCGGCACGCACTTCATCGAGCTGGCCAAGAAGGA 332 Query 41524 GTGCGGCA-TGTGGCACAGCAGCCTGCCGCACAACGATCTCGCGTTCTTCCCTGAGGACA 41582 || | | | || ||| ||||||| |||| || ||||| | |||| || | Sbjct 331 -CGCTGAAGCGCACCAACGCAACCTGCCGGACAAGGACCTCGCCTACTTCGAGGAAGGGG 273 Query 41583 CTCCGGGCTTCAATCACTACGTCCTGTCCATGCTGTGGGCGCAGGACTTCGCTCGGC--A 41640 | | | |||| ||||||| | | || ||||||||| ||||| |||| | Sbjct 272 CGCAGTACTTCGGCGACTACGTGCGCGGCGTGGGCTGGGCGCAGCGCTTCG--CGGCCAA 215 Query 41641 GAATCGTGCGGTGATGTTGCAGATCGTGATC-CAAGCGCTGCG--TCGTCATCTGCCGGC 41697 ||| || | |||||| || | | ||||| | | || |||| |||||| | || Sbjct 214 GAACCGCGAAGTGATGATGGCCAACCTGATCGCCACCG-TGCGCAAGGTCATCACCAAGC 156 Query 41698 C-TTCGA-GCTGACGGAAGAGGCGGTGAACTGCCACCACAACTATTGTG-AGCAGGAGAA 41754 | ||||| || || | ||||||||||||||||| |||||||| ||| |||||||| | Sbjct 155 CTTTCGAGGCCCAC-GTGGAGGCGGTGAACTGCCATCACAACTA-CGTGCAGCAGGAGCA 98 Query 41755 CCACTTCGGGCGCAACGTGTGGGTCACGCGCAAGGGTGCGGTTCGTG-CACGTGAAGACG 41813 ||||||||| | |||||| || || |||||||| ||||| | | || | | | | Sbjct 97 CCACTTCGGCCAGGACGTGTTCGTGACCCGCAAGGGCGCGGTGAGCGCCAAGCG-CGGCC 39 Query 41814 ATCTGGGGATCATTCCGGGATCCATGGGTACG 41845 | ||||||||||| ||||| ||||||| || Sbjct 38 AGCTGGGGATCATCCCGGGCAGCATGGGTGCG 7 Score = 107 bits (118), Expect = 3e-18 Identities = 92/112 (82%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 41000 ATGCCGGACGCGCACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACGC--AAG 41057 ||||| |||| ||||| |||||||| || || || ||||||||| | |||| ||| Sbjct 888 ATGCCCGACGTGCACGTGGGCATCGGTGCGACCGTGGGCTCGGTGATCCCGACGCTCAAG 829 Query 41058 GTGCCATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGC 41109 | ||||||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct 828 G--CCATCATCCCGGCGGCCGTGGGCGTGGACATCGGCTGCGGCATGATGGC 779 >seq111164 Length=7270 Score = 98.7 bits (108), Expect = 1e-15 Identities = 412/637 (65%), Gaps = 19/637 (3%) Strand=Plus/Plus Query 54682 CTCCACGACTTCGGGGCACGCGGCGCTAGCTCTCGTGAGACAGCGGCGCACGGTGGTCTG 54741 || ||||||||||| |||||||||| || | ||| | || || || || || Sbjct 6079 CTGCACGACTTCGGCGCACGCGGCGTGTCGTCGCTGGAGTCGGCCATGCTGGGCGGCATG 6138 Query 54742 GCTCACCTCATCAACTTCATGGGGACCGACACCGTGCTCGCGCTGTATGCTGCACGTCGT 54801 || || || | |||||| ||| || ||||| || ||| ||| | || || ||| Sbjct 6139 GCGCATCTGGTGAACTTCCAGGGCACGGACACGATGAGCGCCCTGCTCGGCGCCCG-CGT 6197 Query 54802 -TATTACGGCGAGAAGGTGGCTGGATTCAGCATTCCTGCCATGGAGCACTTCACCGTGAC 54860 || ||||||||| |||| || ||| ||| || || |||||| ||| | || Sbjct 6198 CTACTACGGCGAGCCCATGGCCGGCTTCTCCATCCCGGCGGCCGAGCACAGCACGATCAC 6257 Query 54861 GGCGTGGGGCCGTGAAAACGAGGCGCAGGCGTACGCGAACATGGTTGACACCTTCGGTGG 54920 ||| |||||||| || |||||| |||| ||| |||||| | | |||||| Sbjct 6258 GGCCTGGGGCCGCGACGGCGAGGCCGAGGCCTACCGCAACATGCTGCGCCGCTTCGGCAA 6317 Query 54921 TGAAGGC-CGTATCTACGCATGTGTGTCGGATGCCTACGACATCTTCAACGCAGTGGACA 54979 ||| || || | | ||||| || |||||||| | | ||| || | Sbjct 6318 GCCTGGCGCGCTGCTGGCCGTC-GTGTCCGACTCCTACGACCTGGACGTCGCCGTTACCC 6376 Query 54980 ACATCTGGGGC--CAA-CAGCTCAAGGACCGGGTTCTGGCTAAAGGTGGGCGAC--TCGT 55034 | |||||||| || | || | |||| ||| | || | || | |||| |||| Sbjct 6377 AGCTCTGGGGCGGCACGCTGCGCGAGGA---GGTGATCGCCAGCGGCG--CGACCGTCGT 6431 Query 55035 CGTTCGTCCTGATTCCGGGGACCCGACATCCGTTGTTCTCTACTGCGTCAAGTCGCTGGC 55094 | | || || || || |||||||| |||| || || | ||| |||| |||| Sbjct 6432 CATCCGCCCGGACAGTGGTGACCCGACCACCGTCGTGCTGCGCACCGTGCAGTCACTGGA 6491 Query 55095 ACGGTCGTTCGGAA-CGACGACCAACAAGAAGGGGTTCCAAGTGCTGCACCCTGCCGTTC 55153 | | ||||| | ||||| ||||| ||||| | | ||||||| || ||| | Sbjct 6492 TGCGGCCTTCGGCAGCGACG-CCAACGCCAAGGGCTATAAGGTGCTGCGCCA---CGTGC 6547 Query 55154 GCGTCATCCAAGGTGATGGCGTGAACCGCGAGTCGATCAGGAGCATCCTGACGGCTCTCG 55213 |||||||||| || || ||| | | ||||| || ||| ||||||||| |||| || | Sbjct 6548 GCGTCATCCAGGGCGACGGCATCACGCGCGACTCCATCGCCAGCATCCTGGCGGCGCTGG 6607 Query 55214 AGATCAACGGATTCTCGGCAGAGAACGTTGCCTTCGGCATGGGTGGCGCCTTGTTGCAAG 55273 || || | ||||| || ||||| ||||||||| ||| ||||| || |||| Sbjct 6608 AGGGTGCGGGCTATTCGGCCGACAACGTCGCCTTCGGCCAGGGCGGCGCGCTGCTGCAGC 6667 Query 55274 GCGTGAATCGAGACACCTTGGGTTTTGCTCAGAAGGC 55310 || || || ||| | |||| || || |||||| Sbjct 6668 AGGTCAACCGCGACTCGCTGGGCTTCGCGATGAAGGC 6704 >seq108438 Length=3402 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 7/150 (5%) Strand=Plus/Plus Query 40962 CCCGACTGCCCTTCATCCATCCGCACGGCGTCGCGTTGATGCCGGACGCGCACGCAGGCA 41021 |||| |||||| || || |||| || |||| |||||||||| ||| |||| Sbjct 2987 CCCGCCTGCCCATCGTCTTCAAGCACATCGCCGCG---ATGCCGGACGTGCATTACGGCA 3043 Query 41022 TCGGCAGCACGGTAGGATCGGTGATCGCTAC--GCAAGGTGCCATCATTCCGGCGGCGGT 41079 ||||| || || || ||||| ||| | || |||| |||||||| |||||||| || Sbjct 3044 TCGGCGCGACCGTCGGCTCGGTCATCCCCACCATCAAG--GCCATCATCCCGGCGGCCGT 3101 Query 41080 GGGCGTGGACATCGGCTGCGGCATGGTGGC 41109 ||| ||||||||||||||||||||| |||| Sbjct 3102 GGGTGTGGACATCGGCTGCGGCATGATGGC 3131 >seq40814 Length=282 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/92 (84%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 186521 CTTGCAGATGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTG 186580 ||||| ||||||| ||| | ||||||||||||| |||| |||| ||||||| |||| | Sbjct 113 CTTGCCGATGGTCGGAGCGGCAGGATTCGAACCTGCGACATCCTGGTCCCAAACCAGGCG 54 Query 186581 CGCTAACCAGACTGCGCTACACTCGGTAAACA 186612 |||| ||||||||||||||| ||| | ||||| Sbjct 53 CGCT-ACCAGACTGCGCTACGCTCCG-AAACA 24 >seq38494 Length=357 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 41381 CAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGACCAGTCGCAA 41440 || || ||||||||||| |||||||||||||| | || |||||| ||||| || || Sbjct 256 CACCTGGGCACGCTGGGCACCGGCAACCACTTCGTGGAGCTGTGCCTGGACGAGGCGGGT 315 Query 41441 GACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGC 41482 ||||| ||| | |||||||| || |||||||| |||||| Sbjct 316 GACGTCTGGGTGATGCTGCACTCGGGCTCGCGCGGCGTGGGC 357 >seq107030 Length=1639 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| |||| ||||||||||||| ||||||||| ||||||| |||||||||| ||| Sbjct 1133 TGGTCGGAGTACAAGGATTCGAACCTTGGACCCCCTGGTCCCAAACCAGGTGCGCT-ACC 1075 Query 186589 AGACTGCGCTACACTC 186604 |||||||| |||||| Sbjct 1074 GGACTGCGCCACACTC 1059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738859546431400