Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq111019 262 2e-65 seq108931 257 8e-64 seq108827 104 1e-17 seq995 89.7 2e-13 >seq111019 Length=18303 Score = 262 bits (290), Expect = 2e-65 Identities = 568/838 (68%), Gaps = 19/838 (2%) Strand=Plus/Plus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 ||||||||||| | | |||||| ||| || ||| |||| || ||| | ||||| | Sbjct 15300 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 15359 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | || ||||||||||| || || || || || ||| | ||| || || || | | | Sbjct 15360 TCGTCGAGATCTACGGCCCCGAATCCTCCGGCAAGACGACGCTGACGCTGCAGGTCATCG 15419 Query 66037 CCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 66096 || | |||||| | |||| | ||||| |||||||||||| ||| | || ||| Sbjct 15420 CCGAGATGCAGAAGATCTCCGGCACCTGCGCCTTCATCGACGCCGAGCATGCCCTGGACA 15479 Query 66097 CTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACA 66156 |||||||| | ||| || ||| | | | | || || | ||||| |||| Sbjct 15480 TCCAGTACGCCCAGAAGCTGGGCGTGAACCTGCAAGACCTGCTGATCAGCCAGCCCGACA 15539 Query 66157 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCA 66216 | ||||||||||| || |||||||| ||| || || || ||| || | ||| Sbjct 15540 CCGGCGAGCAGGCGCTTGAGATCGTCGACGCGCTGGTGCGCTCCGGCTCCGTGGACCTCA 15599 Query 66217 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 66276 |||| | ||||| || || || ||| ||| || || || ||||||| || || || | Sbjct 15600 TCGTCATCGACTCGGTTGCCGCGCTGACGCCCCGCGCCGAAATCGAAGGCGAGATGGGCG 15659 Query 66277 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 66336 || | | ||||||||| |||||||||||| |||||| ||||||||||||||| || Sbjct 15660 ACCAACTCCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCCCTGCGCAAGCTGACCGCCA 15719 Query 66337 CGATTGCCAGCA--CCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGAT 66391 |||| | || | |||| || | ||| | | | || ||| | ||| |||||| Sbjct 15720 CGAT--CAAGAAGGCCAACTGCATGGTCA---TCTTCATCAACCAGATCCGCATGAAGAT 15774 Query 66392 CGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTA 66451 |||| | || | |||| || || || |||||||| || || || ||| ||||| Sbjct 15775 CGGCGTCATG---TTCGGCTCGCCCGAAACGACCACCGGCGGCAATGCGCTGAAGTTCTA 15831 Query 66452 CGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 66511 |||||||||||| |||| ||||| | |||| | | ||| | ||||| |||| | Sbjct 15832 CGCCTCGGTGCGCCTGGACATCCGCCGCATCGGCTCGATCAAGAAGGGCGAGGAGGTCAT 15891 Query 66512 CGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCAC-CGCCAGG 66570 |||| | || || ||||| |||||||||||| | || ||| | | || | Sbjct 15892 CGGCTCCGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTCAGCCCGCCGTTCAAGACA-G 15950 Query 66571 CTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCTGAACTCCTCGACATGG 66630 | ||||| |||| |||||||||| ||||| |||||| | || || ||||||||| Sbjct 15951 CCGAGTTCGACATCCTCTACGGCGAAGGCATCAGCCGCGAAGGCGAGATCGTCGACATGG 16010 Query 66631 CCGT-TTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAAC 66689 ||| || | | || || || | ||| | || ||||||| |||| | | |||| Sbjct 16011 GCGTCGTCGCCAAGG-TCGTCGACAAGGCCGGTGCCTGGTATGCGTACAACGGCGAGAAG 16069 Query 66690 ATCGGCCAGGGCAAGCCCAA-GACCGTGCAGTGGCTGAAGGACAACCCGGACGTCGCC 66746 ||||||||||| ||| ||| | ||| | | | ||| || ||||| ||| ||||| Sbjct 16070 ATCGGCCAGGGTAAGGACAACGCCCGCG-AATTCCTGCGCGAGAACCCCGACATCGCC 16126 >seq108931 Length=1129 Score = 257 bits (284), Expect = 8e-64 Identities = 470/681 (69%), Gaps = 13/681 (2%) Strand=Plus/Plus Query 65917 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 65976 ||||||||||| | | || ||| ||| || |||||||| || || | ||| |||| Sbjct 457 CCACCGGCTCGCTCGGCCTCGACATCGCCCTTGGCATCGGCGGCCTGCCCAAGGGGCGGG 516 Query 65977 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 66036 | | || |||||||| || || || || ||| | || ||| ||| || | ||||| Sbjct 517 TGATCGAAATCTACGGCCCCGAAAGCTCGGGCAAGACCACCTTGGCCCTGCATGTGGTGG 576 Query 66037 CC-AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGAC 66095 || |||| |||||||||||| |||| |||||||| | | |||||||| || | || || Sbjct 577 CCGAATG-CCAGAAGGCCGGCGGCACCGCCGCCTTCGTGGACGCCGAGCACGCCCTGGAT 635 Query 66096 CCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGAC 66155 || | || || ||| || || || | ||||| || |||| |||||| ||| Sbjct 636 CCGGGCTATGCGTTCAAGCTGGGTGTCAATCTTGACAACCTGCTGGTCTCGCAGCCCGAC 695 Query 66156 ACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATC 66215 | ||||| ||||||||||||||| || || || || |||| || |||| Sbjct 696 AACGGCGAACAGGCCCTGGAGATCACCGATACCCTGGTGCGTTCGGGCGCCGTCGACATC 755 Query 66216 ATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGG 66275 |||| | ||||| || || |||||| |||| ||| || ||||||| || || || Sbjct 756 GTCGTGATCGACTCCGTCGCCGCCCTGACGCCGAAGGCCGAAATCGAAGGCGAGATGGGC 815 Query 66276 GACTCGCACGTC-GGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGG 66334 ||| || | | |||||||| |||||||||||| ||||| | ||||||||||||| Sbjct 816 GAC-AGCCTGCCGGGCCTGCAAGCCCGCCTGATGAGCCAGGCGCTTCGCAAGCTGACCGC 874 Query 66335 CACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGG 66394 | |||| || ||||||| || | | | | || ||| | || | |||||||| Sbjct 875 CTCGATCAACAAGGCCAACACCATCGTCATCTTCATCAACCAGATCCGTCACAAGATCGG 934 Query 66395 CAACGTGGGCTACG---GCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTA 66451 ||| |||| ||||| || |||||||| || || || || ||| ||||| Sbjct 935 ---GGTGATGTACGGCAGCCCG---GAAACCACCACGGGCGGCAATGCGCTGAAGTTCTA 988 Query 66452 CGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 66511 ||| ||||||||| |||| ||||| | | || | | ||||| | || ||| | Sbjct 989 CGCTTCGGTGCGTCTGGACATCCGCCGCACCGGTTCGGTGAAGGTTCGTGACGAGATCAT 1048 Query 66512 CGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGC 66571 ||||||| | ||||||||||| |||||||||||| |||| || ||| |||| ||| Sbjct 1049 CGGCAACAACGTCCGCGTGAAGGTCGTCAAGAACAAGGTGGCCCCGCCGTTCCGCGAGGT 1108 Query 66572 TGAGTTTTCCATCGTCTACGG 66592 ||||| |||| | ||||| Sbjct 1109 CGAGTTCGACATCATGTACGG 1129 >seq108827 Length=1124 Score = 104 bits (114), Expect = 1e-17 Identities = 291/443 (66%), Gaps = 4/443 (1%) Strand=Plus/Minus Query 65919 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 65978 ||||||||| | | || ||| ||| |||||| |||| || || | ||||| || Sbjct 471 ACCGGCTCGCTGGGGCTCGACATCGCGCTCGGCGTCGGCGGCCTGCCACGCGGCCGTGTG 412 Query 65979 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGC- 66037 || || |||||||| |||||||| || || || | ||| || || || | | || Sbjct 411 GTCGAAATCTACGGCCCTGAGTCGTCGGGCAAAACCACGCTGACGCTGCAGACCATCGCG 352 Query 66038 CA-ATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 66096 || |||| | ||| || |||| | ||||| ||||| ||||| || | ||||| Sbjct 351 CAGATGC--AAAAGCTGGGCGGCACCTGCGCCTTTATCGATGCCGAGCACGCGCTCGATG 294 Query 66097 CTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACA 66156 | ||||| ||||| | || | | | || | || |||||| || | Sbjct 293 TCGGTTACGCGCAAAAACTCGGCATCAATCTGTCCGAGCTGCTCATTTCGCAGCCCGATA 234 Query 66157 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCA 66216 | ||||||||||| || || || || ||||| || ||| || | || Sbjct 233 CGGGCGAGCAGGCGCTCGAAATTACCGATGCGCTCGTGCGCTCGGGCAGCGTCGACCTCG 174 Query 66217 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 66276 |||| | ||||| || || || || ||| || || ||| ||||||| || || || | Sbjct 173 TCGTCATCGACTCGGTCGCCGCGTTGACGCCACGCGCCGAGATCGAAGGCGATATGGGCG 114 Query 66277 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 66336 |||||| ||| |||| || || ||||||| ||||| |||||||||| || ||| Sbjct 113 ACTCGCTGCCAGGCTTGCAGGCACGTTTGATGTCGCAGGCGCTGCGCAAGCTCACGGGCT 54 Query 66337 CGATTGCCAGCACCAACACGCTC 66359 | || | |||||||||||||| Sbjct 53 CCATCAACCGCACCAACACGCTC 31 >seq995 Length=328 Score = 89.7 bits (98), Expect = 2e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206 || || ||||| ||||||||||||||||| ||||| || || || || || | Sbjct 222 CAACCCGACACCGGCGAGCAGGCCCTGGAAATCGTCGATTCGCTGGTGCGTTCCGGTGCC 163 Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266 || | | ||||| |||||||| |||||||| || || ||| ||||| ||||| Sbjct 162 ATTGACCTGATCGTGGTGGACTCGGTGGCGGCGCTCACACCCAAGGCCGAGCTGGAAGGC 103 Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326 || || || ||| | ||||||||| ||||| ||||| ||||| |||||||| Sbjct 102 GAAATGGGCGACAGCCTGCCCGGCCTGCAAGCCCGTTTGATGAGCCAGGCGCTGCGCAAG 43 Query 66327 CTGACCG 66333 || |||| Sbjct 42 CTCACCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242141789035292