Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq110395 127 2e-24 seq69314 89.7 5e-13 >seq110395 Length=10286 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||| | || ||||| | | | |||||||| || |||||||||||| Sbjct 9983 GCCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 9924 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||||||| || || |||| |||| ||||||||||| || || || Sbjct 9923 GAGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGG 9864 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| || || || |||| | |||| ||| || | ||| |||| ||| || Sbjct 9863 GATGCCTTCCTTATC-CTGGATTTTGGCCTTAACGTTG-TCGATGGTATCGGACGATTCG 9806 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||||| || | ||| || ||||| || || || || || ||||||||| Sbjct 9805 ACCTCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 >seq69314 Length=381 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 154283 CAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGC 154342 ||| || || || ||||||| || | | || || || ||| | || || | || Sbjct 202 CAAAAAGCATGATGACATTTGTGGTTTTGGAGTGCCGGCGTTAAACAACGTTGGGGTTGC 143 Query 154343 GTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATC 154402 ||| |||||| | |||||||| | |||||||| ||||||| ||| ||||| || Sbjct 142 GTGTGTAAACCAGCGCTCGCTCATCAGGTTGTACGTTTTGATGGCGCTTTCAATATCTTC 83 Query 154403 GCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATT 154462 ||| || || | || |||||||| | |||||||||||| |||||||| | | || Sbjct 82 TTTGTGGATACCTACCGATACGCGCATAAACATGTGCTGCGGGCGTTCGGCAATTTTACC 23 Query 154463 GTCAATCTTCAAGAGATAT 154481 ||||| ||| || || ||| Sbjct 22 GTCAAGCTTTAACAGGTAT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495572589060720