Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq109371 113 1e-20 seq109454 111 5e-20 >seq109371 Length=32687 Score = 113 bits (124), Expect = 1e-20 Identities = 177/247 (72%), Gaps = 10/247 (4%) Strand=Plus/Plus Query 30628 CCCCAACACGGAACCAGAATGTCTGCGTCTGCGACGATGGCGCGGAAGTGTTC--CGTGC 30685 ||||| || || || || ||||| || || || |||| || || |||||| || | Sbjct 1571 CCCCAGCAGGGGACGAGGATGTCGGCCTCGCAGATGATGTCGGTGATGTGTTCGCCGATC 1630 Query 30686 TCAGCGGGCCAAACGGATCATCCTGCCTGCGG--AGCTCTTTCACGTCAGTGGCGCGGTA 30743 || || || |||||||| || || ||| || || |||||| |||||||| || Sbjct 1631 TCGTCG--CCGAACGGATCGTCTA--CTCCGGCCAGGTCGCGCACGTCGGTGGCGCGATA 1686 Query 30744 GCAGAACACATTGCCGACGATGAACCGGTGACCTCCGTTGCGCAGAGT-GAAGCCGCGCC 30802 | |||||| |||||||||||||| || || || || | || | ||||||| || Sbjct 1687 GGCGAACACGTTGCCGACGATGAAGCGCTGGCCGCCCCAG-GCTTTGACGAAGCCGGTCC 1745 Query 30803 ACTTGCGTACCGTTGCATCGTCGATGCTGGCGTCCGCGGTGCTGGGGTTGACCCCAAAAT 30862 ||||||| ||||| || ||||| | ||||||| || |||||||||||||| || || Sbjct 1746 ACTTGCGCACCGTCGCGTCGTCTTCGGTGGCGTCGGCTGTGCTGGGGTTGACGCCGAAGA 1805 Query 30863 ATGCGTA 30869 | ||||| Sbjct 1806 AGGCGTA 1812 >seq109454 Length=55839 Score = 111 bits (122), Expect = 5e-20 Identities = 292/443 (66%), Gaps = 22/443 (5%) Strand=Plus/Minus Query 33266 TGCCATCGTCGTCATCGCCTTGCTCGGACAGGCCGGTGATAGCCTTCAGCGTGTATCGCT 33325 ||||||||||||| |||| | ||||| ||| ||| || || |||| || | |||| Sbjct 43345 TGCCATCGTCGTCGGCGCCCTTCTCGGCCAGACCGCAGACCGCTTTCATGGTCTGGCGCT 43286 Query 33326 CCAGGTAGGTTTTGGTGCTG-GCTC-TGGCCTGGATGGCGTTCTTCGCGCCACCGGTATC 33383 | |||||||| || ||| | ||| | |||||||||||||||||| |||| | || Sbjct 43285 CGAGGTAGGTCTT--TGCGGAGCTGATCGCCTGGATGGCGTTCTTCCCGCCGCTCTGGTC 43228 Query 33384 TGGCGGCCCGCCCATGCTTACGCTTTCCTCGTGGCCTCCAACATGGCGGAGGTAGCAGGT 33443 ||||| ||||| | | | | | || |||||| | || ||| ||||||| Sbjct 43227 GGGCGGGCCGCCGAGGGTGGCTGTCTCGAAGTGGCCCTTCTCGTGCTTCAGGAAGCAGGT 43168 Query 33444 AACTTCCATCCAGTCTTTCTCGTCGCGAGTGAGCTTCCACGAAGAGGAAAGTCCGTGCTT 33503 || || |||||| | ||| | |||| |||||| | | || |||| ||| Sbjct 43167 CACCTCAATCCAGGCGGGCTCCTGCTTCGTGACCTTCCAACTGGTGCTGAGGCCGTACTT 43108 Query 33504 GGAGAGCGCCGGAGTGACTGCATTCACCACATCATGCAACTCGGCGTAGCTCTTGTTCTT 33563 |||||||| || ||| | || | |||||| || || ||| |||| | | || | Sbjct 43107 AGAGAGCGCGGGCGTGGCGGCCTCCACCACGTCGGACAGCTCCGCGTGCTTGTAGTCGGT 43048 Query 33564 CAATGGGCCATCGGT------------GAC---CTTTCGGCCCTTTATGATGATCACCGC 33608 || ||| | | | ||| ||| || ||| ||||| |||||| Sbjct 43047 GAAGCCGCCTTTGTTGTTGGGGAAGTGGACGCGCTT---GCGCTTGATGATCTCCACCGC 42991 Query 33609 CTCAGCCTTGAAGTTGGCGAAGGCGGCGTCGTAGGCCTTTTTCGCCTCGGCTTTCTCCCA 33668 ||||||||||| |||||| ||||||| ||||||||| | || ||| ||||| Sbjct 42990 TTCAGCCTTGAATGCGGCGAACGCGGCGTTGTAGGCCTTCTCGGCTTCGCGACCTTCCCA 42931 Query 33669 GCGCTCTTGAAGGTCCATCATCT 33691 ||| || || | ||||||||||| Sbjct 42930 GCGGTCCTGCAAGTCCATCATCT 42908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149670896469908