Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq63466 150 5e-32 >seq63466 Length=20540 Score = 150 bits (166), Expect = 5e-32 Identities = 276/404 (68%), Gaps = 3/404 (1%) Strand=Plus/Minus Query 1531 TGGCTCGCGTACCCGTTGCAGCATCCGGGTGCCAAGATGAAATCGACCATCGTGATCCAT 1590 ||| | || ||||| | ||| | || || |||||| | || ||||| | || || Sbjct 13154 TGGATGGCCTACCCCCTCCAGAACCCCGGCGCCAAGCTCCCCTCCGCCATCATCATGCAC 13095 Query 1591 GGTCCGCAGGGCACCGGCAAGAACATGTTCTTCGATGAGTACATGAAGCTTTACGGTGAG 1650 || || |||||||| ||||| | || ||||| | | | ||| | ||||| || Sbjct 13094 GGCCCCCAGGGCACGGGCAAAAGCACCATCTTCCAGGTCCTCGCCAAGATCTACGGCGAC 13035 Query 1651 TACGGCCGCGTGCTTGACCAGGCCGCCCTAGAAGACAAGTTCAA---CGATTGGGCAAGC 1707 ||| || |||||| ||||| || ||| |||||||||||||| ||| |||| | Sbjct 13034 TACAGCACCGTGCTCAACCAGCGCGGCCTCGAAGACAAGTTCAACGCCGACTGGGTGGAC 12975 Query 1708 CGCAAGCTGTTCCTGCTGGCCGACGAAGTGGTTGCACGCACCGAGGTCTACCACCTCAAG 1767 ||||| ||||| || ||||| ||||| || | ||| ||||| | | ||| |||| Sbjct 12974 GAAAAGCTCTTCCTCCTCGCCGAGGAAGTCGTCACCCGCGCCGAGATGTGGCACATCAAA 12915 Query 1768 AACAAGCTCAAGGCGCTGATCACCGGCGATCGCATCCGCATCAACCCCAAGAACATCCAG 1827 ||| ||||||| | ||| |||||||||| | |||||| ||||| |||| || || Sbjct 12914 AACGAGCTCAAAGAGCTCGTCACCGGCGACTGGATCCGCGTCAACGGCAAGCACGTCGGC 12855 Query 1828 GCCTACGAGGAAGACAACCACGCCAACCTGGTCTTCCTCTCAAACGAGGCGATGCCGGTC 1887 |||| | | ||||| | |||| | |||| |||||| ||||||| ||| || Sbjct 12854 GCCTTCCGCCAGCGCAACCGCCTCAACATCGTCTACCTCTCCAACGAGGGCCAGCCCCTC 12795 Query 1888 GTGCTGGAAGAGGATGACCGCCGCCATGCGGTGATCTGGACGCC 1931 | || | || ||||||||||| |||| | |||||||| Sbjct 12794 CCCATCGAGAACGACGACCGCCGCCACCTGGTGGTGTGGACGCC 12751 Score = 105 bits (116), Expect = 2e-18 Identities = 411/628 (65%), Gaps = 46/628 (7%) Strand=Plus/Minus Query 6517 ATCATCAACGGCATTGAGTACGACGCGATCGGCCGGATTCGCGGCTACTGGTTGTTCGGA 6576 ||| ||| |||||| || ||||||| | ||||||| | |||||||||| ||| ||| Sbjct 7204 ATCGTCAGCGGCATCGAATACGACGTGCTCGGCCGCGTCGTCGGCTACTGGCTGTG-GGA 7146 Query 6577 GC-GCATCCCGGTGA-----GGCTGTGCGTGGCTCTGTAC-GCTTGAGCAGTTCGTTGGT 6629 | ||| || || || |||| || | ||| | || |||| ||| || Sbjct 7145 TCAGCACCCTGGCGACACCGGGCTCATCGGCGGCCTGCGCCGCCAAAGCAAG-CGT--GT 7089 Query 6630 GCCGGCATCCGACATCATCCACCTCTACAACCCCGTCCGCCCGGGGCAGGGACGCGGCAT 6689 || || || |||||| ||| || | ||| | ||| ||||||||||| | ||||| Sbjct 7088 CCCCGCGTCGTCCATCATTCACTACTTCGCCCCTGACCGGCCGGGGCAGGGCAGGGGCAT 7029 Query 6690 TACGCGCTTCGCGCCGGTG-ATCGCGCGAGTGCGCGACCTGATGCTGTACGAAGACGCCG 6748 |||| | || | | | ||||| || |||||||||||| ||||||||||||| ||| Sbjct 7028 ATCGCGTCTGGC-CAGCAGCATCGCCCGCGTGCGCGACCTGGCGCTGTACGAAGACTCCG 6970 Query 6749 AGCTCGCGCGTAAGAACCTGGAAGCGCGGCTTGGTGTGATCGTCAGTGGCGA---CATCG 6805 ||| || || ||||||||||| || || || || || || ||||| || || Sbjct 6969 AGCAGGCCCGCAAGAACCTGGAGAACCGCCTCGGCGTCGTCTGGAGCGGCGAGCCCAGCG 6910 Query 6806 A-CTCGATGTCCAACGCGGACGATGACGGCCCTTCGCAGCTCGGCTCAGATCGCGACCAG 6864 | |||| ||||||| | || || || | || | | ||||||| || | Sbjct 6909 ACCTCG----CCAACGCAGGCGGCGAGGG---TGAGC----CACCCAAGATCGCCTCCGG 6861 Query 6865 GTCACCGACCTTGGGCCA-CTGCCCAGCGGTGGGGTCACCCACATCACTGGTGCCACAGC 6923 ||| | ||||| | |||||||||||||| || | | || || | | | | Sbjct 6860 -----CGAAC-TGGGCGACCTGCCCAGCGGTGGCGTGATGTCCCTCCCTTCAGGCGCGGG 6807 Query 6924 CTTCCAGACTGTCGAGCCAAAGCCG------GCAGGGGGCTACGTCGAGTATTGCAAGTT 6977 | ||| |||| | | |||| || ||||| ||||| || ||||| Sbjct 6806 GCAGCTGACCGTCGTG---ACGCCGCACATCGCGCCTGGCTATGTCGACTACGTCAAGTA 6750 Query 6978 TAACGCGCACATCATCACTGCTGGCATCGGTGTCCCGTACGAG-TCGGCCACCGGTGATA 7036 | ||| ||||| | || |||||||| | |||||||| || | ||| || || | Sbjct 6749 CCAGATCCACCTCATCGCCGCGGGCATCGGCAGCACGTACGAGCTCTG-CACGGGGGACA 6691 Query 7037 TGCGTGAGGTGAACTTCTCCAGTGCCCGCATCCGGCAGATGGAGTTCCGTCGTGATTGCG 7096 || | ||||| |||||| ||| ||||||||||| || || || | || || || || Sbjct 6690 TGAGCGAGGTCAACTTCAGCAGCGCCCGCATCCGCCAAATCGACATGCGCCGCGACGTCG 6631 Query 7097 AGCAGATGCAGTGGCTGGTGCTAGTCCC 7124 ||||| |||||||| ||| | || || Sbjct 6630 AGCAGCACCAGTGGCTCGTGTTGGTGCC 6603 Score = 89.7 bits (98), Expect = 1e-13 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 586 GAGTACTGGCCGGCCGGTATGGTCAAGAAGGGCCACTTCCACCTGATCGGC--GGAAGTC 643 || ||| | || ||||| | | |||| |||||||||||||||| |||||| || | | Sbjct 14099 GACTACAGCCCCGCCGGCCTCGGCAAGCAGGGCCACTTCCACCTCATCGGCCTGGCCGGC 14040 Query 644 CCCAG-TGGATCTTGCTGGTGGCCGAGGGCTACGCCACTGCGGCCACGCTGCACATGGCT 702 | | | | || | ||| ||||||| |||| |||||| | |||| |||||| || Sbjct 14039 CGCGGCAGCGTCATCCTGCTGGCCGAAGGCTTCGCCACCGGCGCCAGCCTGCACGAAGCC 13980 Query 703 ACGGGCTACCCGGTGGCCGTGGCGTTCGATGCCGGCAACATGCTGGCCGTCGCCTCGGCC 762 || ||| || || ||||| || ||||| ||||||||| | | ||||||| ||| Sbjct 13979 ACCGGCCTGCCCGTCGCCGTCGCCTTCGACGCCGGCAACCTCATCCACGTCGCCAAGGCG 13920 Query 763 CTGGC 767 ||||| Sbjct 13919 CTGGC 13915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128626722296138