Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq106734 89.7 5e-13 >seq106734 Length=403 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 ||||| || || || ||||| ||||||||||| || || || || ||||| Sbjct 236 AGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAAC 177 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | |||| ||||| ||||| || || || ||||| || || ||||| Sbjct 176 TGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATC 117 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||||| |||||||| || || || || | || ||||| Sbjct 116 TTGGCCTTGA-CGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCC 58 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || ||||| || |||||| Sbjct 57 CGTGAGCGTCTTCACAAAGATCTGCATC 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451374909901960