Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq108184 168 3e-37 seq53202 165 3e-36 seq107328 154 6e-33 seq81106 114 5e-21 seq108124 82.4 3e-11 >seq108184 Length=27730 Score = 168 bits (186), Expect = 3e-37 Identities = 619/951 (65%), Gaps = 30/951 (3%) Strand=Plus/Plus Query 53843 CTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTT 53902 |||| | ||||| ||| | ||||| | |||||||| | | | ||| |||||| || Sbjct 19052 CTGGGTCTGGACTGACCCAGAGCGCACTGACCGGCTAGCCCGCATCTATAACGAGCGTTT 19111 Query 53903 CAACAACATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCT 53962 |||||| ||||| |||||| ||| |||| || |||| || | | ||| Sbjct 19112 CAACAATATCGCGCCGCGCGCCTTCAACGGTGACCATCTGAACTTGGCCCACACATCGG- 19170 Query 53963 GCGCTTCGAC-CTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCG 54021 |||||| || || | | |||||||||| | ||||||||| ||| || || Sbjct 19171 GCGCTTTCACGCTCTATGCGCACCAGAAGCGTGGCATCTGGCGGATCATCACGGCCGGTT 19230 Query 54022 ATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCA 54081 | || || ||||| || |||||||||||||||||| | |||||| |||| | || Sbjct 19231 CGACCTATCTGGCGCATGCGGTCGGCGCGGGCAAGACGATGACGATGGCTGCGAGCATCA 19290 Query 54082 TGGAGGAGCGCCGGCTGGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGC 54141 |||| |||||||||| || ||| | |||| | ||| || ||||| || | Sbjct 19291 TGGAACAGCGCCGGCTCGGGCTGATCGCCAAGGCAATGCTCGTCGTGCCCGGTCATTGTC 19350 Query 54142 TGGCGCAATTCGCGCGCGAGTTTCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGG 54201 |||| || ||||||||| || || | ||| || ||| ||| ||| |||| |||| Sbjct 19351 TGGCACAGGCCGCGCGCGAATTCCTCGCGCTCTATCCGAACGCCCGCATTCTGGTGGCGG 19410 Query 54202 ACGAGCAGAATTTCCACACGCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAACA 54261 |||| ||| ||| | | |||| || || || | |||| || ||| | || Sbjct 19411 ACGAAACGAACTTCGCGAAGGACAAGCGGAAACGCTTTCTGGCGCGTGCGGCGACCGCCA 19470 Query 54262 ACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGTCGCATCGGCATGTCCGACGA-G 54320 | |||||||||||| |||||||| ||||||||| | |||||| | ||| |||| Sbjct 19471 GCTGGGACGCGATCATTATCACGCATTCGGCGTTCCGATTCATCGGTGT-TCCCACGACC 19529 Query 54321 TATGCGTCGCAGTTCATCAGCGACCAGATCGA---CGA-GTGGAAAACCGCGCTCGCCGA 54376 | | | | | | ||| ||| || | || | | | ||| | ||||| | Sbjct 19530 TTCGAGCACCGGATGATCCAGGACGAGCTGGATCTCTACGAGGA----CATGCTCGGC-- 19583 Query 54377 GACGGACAAGAGCGAC---CGCATCACGCGTAAGCAGATCGAGCGCCGTATCGAGCAGCT 54433 | || | || ||||| || | |||| || | | | ||||| | ||| || Sbjct 19584 -AGGGCCGAGCGCGACGATCGGGTGTCGCGCAAACGGCTGGAGCGTTTGAAGGAG-GGCC 19641 Query 54434 CGAACG-CCGGCTGGAGGCAAAGCAGGGCAACGAGAAGAAGGACAAGGTGCTGTCGTTCG 54492 ||| | ||||| ||| ||| ||| | |||||| | | || || || Sbjct 19642 TGAAGGAACGGCTCGAGCTGCTTCAG----ACGCCA--AAGGACGATCTACTCACGATCT 19695 Query 54493 AGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAATTCCGCAAACTCGACT 54552 |||| | ||| |||||| | |||||||||| || || ||||| ||||| || Sbjct 19696 CGGAGATCGGCATCGACCAGATCATCGTCGACGAAGCGCAGGAGTTCCGTAAACTTAGCT 19755 Query 54553 TCGCGACGCAGCAGGGCAAC-ATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATG 54611 |||| || || || | | || | ||||| |||| || |||||||||||||| | Sbjct 19756 TCGCCAC-CAACATGTCGACGCTGAAGGGTGTCGATCCCAATGGCTCGCAGCGCGCCTGG 19814 Query 54612 GACCTGTTCATGAAGGCGCAATACCTGCGCTCGAAGAAGCCGGGCCGCGCGCTCGTCGCC 54671 ||||| | ||||| | | | | | ||||||| || ||||||||||| || | Sbjct 19815 GACCTCTATGTGAAGTCCCGGTTCATCGAGACGAAGAACCCCGGCCGCGCGCTTGTGCTC 19874 Query 54672 GCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCTGTTCACGGTGCAAC-GCTTCTT 54730 || || || || || ||||| |||||| | |||||| ||||| ||||||| | | | ||| Sbjct 19875 GCTTCCGGAACACCCATCACCAACACGCTTGGCGAGATGTTCTCGGTGCAGCGGATGCTT 19934 Query 54731 CCAGCCCGAGCAGATGGCCGAGGACGGTCTGGACACGTTCGACGCGTGGGC 54781 |||| ||| | || ||| | | ||| || |||||| || ||||| Sbjct 19935 GGAGCCGAAGC-GCTGAGAGAGCGCAGCCTGCACGAGTTCGATGCCTGGGC 19984 Score = 134 bits (148), Expect = 6e-27 Identities = 336/499 (67%), Gaps = 21/499 (4%) Strand=Plus/Plus Query 55384 AGATCGCGTTCATGCGCGACAACAAGGAGCACGCGAAG--AAGGAGCGCCTGTTCGCGGA 55441 ||||||| ||||||| || ||||| || ||| || | ||| |||| ||||||| || Sbjct 20587 AGATCGCCTTCATGCAGGATTACAAGAAG-ACG-GACGCCAAGCAGCGGCTGTTCGGCGA 20644 Query 55442 CATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATGGAAACCGGCGT 55498 | |||| ||||| || | ||||||||| || ||||| |||||||| Sbjct 20645 TGTCCGCGCCGGCAAGGTTCGGTTCCTGATCGGCTCATCCGATACCATGGGCACCGGCGT 20704 Query 55499 CAACGTGCAGAAG--CGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCA 55556 ||| |||| || ||||| | | | | ||||| || | ||||||||| || | Sbjct 20705 CAA--TGCACAACTTCGCCTGAAGGCGCTGCACCATCTCGATGTGCCGTGGTTGCCCTCG 20762 Query 55557 TCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCGC 55616 ||||||||||||||||||||||| | || ||||||||||| || | |||| Sbjct 20763 CAGATCGAGCAGCGCGAGGGCCGCATCGTGCGGCAGGGCAACCAACACGATGAGGTCGAT 20822 Query 55617 ATCCGCGCGTGGGCGACGAAGGGC-AGCTACGACTCGACCATGTGGGGGATGAACGCCCG 55675 ||| ||| | ||||| ||||| ||| ||| | ||||||||| || |||| || Sbjct 20823 ATCTTCGCCTATGCGACCGAGGGCTCGCT-CGATGCCACCATGTGGCAGAACAACGAGCG 20881 Query 55676 CAAGGCCCGCTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGCTCGCTCGAGG 55734 ||||||||||||||||| ||||||| ||| || || || | || | | || | Sbjct 20882 CAAGGCCCGCTTCATCGCGGCCGCGCTCAGCGGTGA-TACCTCGATCCGGCGGTTGGAAG 20940 Query 55735 ACGTGTCCGAGGCATCGGC------GTTCGACATGGCCGCCGCGCTGGCGTCGGGCGACG 55788 || || |||| ||| ||||| ||||||| ||| | || ||||| || Sbjct 20941 ACCTGGGTGAGGGCCAGGCGAACCAGTTCGCCATGGCCAAAGCGATAGCCTCGGGTGATC 21000 Query 55789 AGCGCTATCTGAAGATGGCCGGCCTGAAGGCCGACGTCGAGCGCCTGGAGCGCCTGAGCT 55848 |||| | || ||| || || || ||||||| ||| || || || ||||| || Sbjct 21001 AGCGATTGATGCAGAAAGCTGGGCTCGAGGCCGATATCGCCCGGCTCGAACGCCTCCGCG 21060 Query 55849 ACGCGCACCACGACGACCA 55867 ||| || || |||||||| Sbjct 21061 CCGCCCATCAGGACGACCA 21079 >seq53202 Length=9363 Score = 165 bits (182), Expect = 3e-36 Identities = 239/338 (71%), Gaps = 22/338 (7%) Strand=Plus/Plus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 ||||||||| || || ||||||||| |||||||||| || || ||| ||||||| ||| Sbjct 1814 CATGGCATCAGTGAATAAAGTCATCATCGTCGGCAACCTGGGGCGCGATCCGGAAATCCG 1873 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATAT--CCGTCTCGCGACGACCGATCGCTAC 9227 |||| | || ||||||||||| ||| |||| || ||| | || || | || | Sbjct 1874 CTACATGCCCAGCGGCGACGCCATCGCCAACATTGCCG--TGGCCACCTCGTTCCGTTCG 1931 Query 9228 AAGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTC 9287 || |||||| | ||||||| |||||| ||||| ||||||||| || | |||||| Sbjct 1932 AAAGACAAGAACACCGGCGAGCAGAAGGAAACCACCGAATGGCACCGCATCTCGTTCTTC 1991 Query 9288 GGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAG 9347 ||||| || ||||||||||| | | || |||| || || | ||||||||| | || Sbjct 1992 GGCCGTCTGGCCGAGATCGTTGGCCAGTACCTGAAAAAAGGTTCGTCGGTCTACGTTGAA 2051 Query 9348 GGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGC---------TAC 9398 || || | ||||||| |||| | ||| | ||||| || ||| Sbjct 2052 GGCCGTCTGCAGACGCGCAAGT---------ATACCGACAAGGATGGCGTCGAGAAGTAC 2102 Query 9399 ACGACCGAGATCGTCGCCGACAGGATGCAGATGCTCGG 9436 ||||||| || |||||||| | |||||||||||||| Sbjct 2103 GCGACCGACATTGTCGCCGAGAACATGCAGATGCTCGG 2140 >seq107328 Length=16160 Score = 154 bits (170), Expect = 6e-33 Identities = 234/330 (71%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 |||||| ||||||||||||||||||| ||||||| |||||| |||||| || ||| Sbjct 16082 CATGGCCAGCGTCAACAAAGTCATCCTCATCGGCAACCTCGGCCGCGACCCCGAGGTCCG 16023 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAA 9229 ||| ||| ||||||| ||| | || ||| | || || || ||| ||| || Sbjct 16022 TTACAACCCCAGCGGCGGCGCCTGGTGCACGATCAGCCTGGCCACCACC---CGCAACTG 15966 Query 9230 GGACAAG-GCGAG--CGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTT 9286 | | || ||||| |||||| | |||||| |||||| ||||||||||| | |||| Sbjct 15965 GAAGAACCGCGAGACCGGCGAACGCCAGGAAGAGACCGAATGGCACCGCGTGGTTTTCAA 15906 Query 9287 CGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGA 9346 || ||| | || || || | | ||| |||| |||||| | |||||| |||| Sbjct 15905 CGACCGTTTGGCTGAAATTGCTGGCGAATACCTGAAGAAGGGCCGCCCCGTCTACGTCGA 15846 Query 9347 GGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGA 9406 || ||| | ||||| || ||||||||||| | ||| |||| |||||| ||||| Sbjct 15845 AGGCCGCCTGAAGACCCGCAAGTGGCAGGACAAGGAAGGCAAGGACACCTACACCACCGA 15786 Query 9407 GATCGTCGCCGACAGGATGCAGATGCTCGG 9436 |||| | |||||| |||||| |||| || Sbjct 15785 GATCATTGCCGACCAGATGCAACTGCTGGG 15756 >seq81106 Length=13242 Score = 114 bits (126), Expect = 5e-21 Identities = 165/231 (71%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 3572 CGCGCCGCGCGTCGAGATACGCGGCAAGGTCGGCAAGGTGGACGCCCTTCGCGCACTTCT 3631 |||| || |||||| ||| ||| ||||||| ||||| || ||||| |||| |||| Sbjct 9797 CGCGGCGATCGTCGATGTACTTGGCCAGGTCGGTCAGGTGCACACCCTTGGCGCTTTTCT 9738 Query 3632 GCGAACGC---TCCATCCGCACGATCGGCAAGGTGATGTCGCCGTCGAGCAC---CTTGC 3685 ||| | | || || |||||||| |||| |||| ||||| ||||| ||||| Sbjct 9737 GCGTGCCCGAGTCGATGCGCACGATGGGCAGCTTGATCTCGCCC---AGCACGGCCTTGC 9681 Query 3686 GTTGCAGCTTCTCAGGGGACAGGTGCGCGAAGTAGTCGCGGCAGACGAGATCGAGGGGGA 3745 | | | ||| || | | ||||||| |||||||||||| ||| | | ||||| Sbjct 9680 GGAGGAACTTGTCGGTGCTGAGGTGCGAGAAGTAGTCGCGCACCACGGTGGCCACGGGGA 9621 Query 3746 TGACGGCGCGGCCGTCGTATTGAGCCATCAGAAGGAAAGCGGTGTTCATGG 3796 |||| || ||||| ||| || ||||| || ||||| ||||||||||||| Sbjct 9620 TGACCGCCATGCCGTTGTACTGGGCCATGAGCAGGAAGGCGGTGTTCATGG 9570 >seq108124 Length=5758 Score = 82.4 bits (90), Expect = 3e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 7210 GTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGC-GTATCGTG 7268 |||||||||||||| |||||| |||| | |||||||| | ||| | || ||| |||| Sbjct 4516 GTGGCAGAGTGGTCGAATGCACCGGACTCGAAATCCGGCGTACAGTTATGCTGTACCGTG 4575 Query 7269 AGTTCGAATCTCACCGCCTCCGCCAGT 7295 ||||||||||||||| ||||||||| Sbjct 4576 AGTTCGAATCTCACCCTTTCCGCCAGT 4602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200291384278836